Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 1.5e-251 872.5 455 100.0
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 7.0e-246 853.6 464 97.2
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 1.0e-140 504.2 464 59.7
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 4.5e-120 435.6 460 54.8
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 2.8e-117 426.4 449 53.5
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 2.6e-115 419.9 449 51.9
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 3.8e-111 406.0 443 51.7
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 3.3e-110 402.9 451 51.7
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 5.6e-110 402.1 461 48.4
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 1.2e-109 401.0 457 49.5
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 9.8e-107 391.3 461 47.9
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 8.3e-106 388.3 598 41.8
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 2.4e-105 386.7 466 47.6
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 4.1e-105 386.0 581 42.0
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 3.5e-104 382.9 461 46.9
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.0e-103 379.0 458 48.0
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 5.6e-102 375.6 461 46.4
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 6.2e-101 372.1 450 46.9
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 2.3e-100 370.2 457 47.3
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 2.0e-99 367.1 455 47.3
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 2.6e-99 366.7 448 47.5
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.4e-99 366.3 449 47.0
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 9.8e-99 364.8 453 45.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.3e-98 364.4 445 48.3
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 2.9e-98 363.2 442 48.4
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 2.4e-97 360.1 422 48.6
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 2.4e-97 360.1 447 47.4
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 4.1e-97 359.4 448 48.0
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 2.7e-96 356.7 447 47.2
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.3e-95 353.6 436 47.7
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 5.6e-94 349.0 453 47.0
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 7.3e-94 348.6 453 47.0
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.2e-93 347.8 454 47.1
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 1.2e-93 347.8 462 45.0
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 1.2e-93 347.8 440 47.0
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 3.6e-93 346.3 454 45.6
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 3.6e-93 346.3 440 47.0
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 8.1e-93 345.1 454 46.9
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 1.5e-91 340.9 444 44.4
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 1.3e-90 337.8 400 50.0
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 3.7e-90 336.3 453 44.4
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 8.3e-90 335.1 407 46.9
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 4.6e-88 329.3 400 49.0
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.7e-87 327.4 448 44.0
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 3.9e-87 326.2 262 64.5
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 6.6e-87 325.5 451 43.5
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 6.6e-87 325.5 448 45.3
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 9.5e-86 321.6 558 37.3
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 2.1e-85 320.5 448 43.1
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 2.1e-85 320.5 447 44.5
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.8e-85 320.1 262 63.7
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 1.8e-84 317.4 456 41.0
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.4e-84 317.0 456 41.9
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 5.2e-84 315.8 457 42.5
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 6.8e-84 315.5 456 41.2
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 2.2e-82 310.5 455 41.5
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 3.5e-80 303.1 452 41.2
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 1.9e-78 297.4 375 45.3
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 6.2e-77 292.4 448 40.0
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 6.2e-77 292.4 448 40.0
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 6.2e-77 292.4 455 39.6
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.5e-75 287.7 455 40.7
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 2.0e-75 287.3 443 40.2
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 2.2e-74 283.9 450 37.6
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.9e-74 282.7 459 39.2
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 3.2e-73 280.0 432 39.1
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 5.4e-73 279.3 408 41.2
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 7.1e-73 278.9 449 39.2
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 2.1e-72 277.3 441 38.8
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 3.0e-71 273.5 455 38.0
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 3.9e-71 273.1 417 40.5
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.1e-70 271.6 420 40.5
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 3.3e-70 270.0 405 39.5
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 4.3e-70 269.6 590 33.6
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 6.2e-69 265.8 427 39.3
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 1.2e-67 261.5 435 35.4
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 3.2e-65 253.4 391 40.4
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 1.3e-63 248.1 434 35.0
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 5.1e-63 246.1 424 35.1
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 6.7e-63 245.7 446 35.4
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.5e-62 243.8 446 35.0
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 7.4e-62 242.3 443 38.6
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.3e-61 241.5 367 40.9
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 1.1e-60 238.4 306 47.1
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 9.0e-60 235.3 438 33.1
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 4.5e-59 233.0 439 36.4
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 3.2e-57 226.9 438 33.3
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 6.0e-56 222.6 403 39.7
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 5.1e-55 219.5 318 40.6
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.5e-54 218.0 412 36.4
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 3.4e-51 206.8 414 34.3
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 4.2e-49 199.9 255 45.1
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 7.1e-49 199.1 171 59.6
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 6.0e-48 196.1 208 46.6
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 8.7e-47 192.2 453 31.8
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 1.5e-46 191.4 331 40.2
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 8.2e-45 185.7 259 37.8
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.7e-42 177.9 338 39.9
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 3.8e-42 176.8 366 33.6
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 5.0e-42 176.4 338 39.1
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 2.5e-41 174.1 295 40.3
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 5.5e-41 172.9 339 38.3
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 1.8e-39 167.9 133 63.9
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.5e-38 164.9 274 37.6
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 2.4e-36 157.5 135 60.7
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 4.2e-33 146.7 298 35.6
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.3e-29 135.2 293 33.4
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 8.0e-24 115.9 282 33.7
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 1.0e-23 115.5 273 28.6
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.0e-22 111.3 299 33.4
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 2.2e-21 107.8 119 52.9
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 1.5e-17 95.1 134 45.5
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.9e-17 94.7 84 59.5
Pp3c12_25780 Physcomitrium patens HOM05D058747 ORTHO05D007778 4.4e-14 83.6 257 26.1
Pp3c4_4010 Physcomitrium patens HOM05D058747 ORTHO05D007778 1.3e-13 82.0 254 28.0
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 4.8e-13 80.1 131 39.7
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 4.8e-13 80.1 131 39.7
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 6.3e-13 79.7 122 41.8
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 6.3e-13 79.7 122 41.8
Mapoly0008s0044 Marchantia polymorpha HOM05D006138 ORTHO05D007778 5.9e-11 73.2 449 22.3
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 1.3e-10 72.0 94 36.2
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.1e-09 68.9 129 38.8
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 8.8e-07 59.3 76 43.4
CSS0037607 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 4.4e-06 57.0 44 63.6


User provided reference genes

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