Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 2.0e-189 665.6 335 100.0
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 2.5e-91 339.7 248 66.5
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 2.5e-91 339.7 249 65.5
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.8e-90 336.3 247 65.6
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 7.5e-88 328.2 247 63.2
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 9.8e-88 327.8 247 63.2
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 7.0e-86 321.6 247 61.5
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 2.0e-85 320.1 253 60.9
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 3.5e-85 319.3 251 59.0
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 7.8e-85 318.2 238 65.5
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 1.1e-83 314.3 248 62.5
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 2.5e-83 313.2 248 60.9
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 3.3e-83 312.8 244 62.3
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 5.6e-83 312.0 252 59.9
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 1.1e-81 307.8 242 60.7
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-81 307.8 230 64.3
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 1.4e-81 307.4 245 60.0
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 8.9e-81 304.7 248 60.9
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 1.2e-80 304.3 246 60.6
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 2.0e-80 303.5 253 58.5
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 2.0e-80 303.5 245 60.8
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 3.4e-80 302.8 242 58.7
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 9.8e-80 301.2 245 58.0
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 1.7e-79 300.4 239 59.8
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 2.2e-79 300.1 235 62.6
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 6.4e-79 298.5 238 61.3
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 3.2e-78 296.2 245 58.8
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 1.6e-77 293.9 242 56.6
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 1.6e-77 293.9 242 58.3
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 2.7e-77 293.1 240 57.9
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 3.5e-77 292.7 239 58.6
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 4.6e-77 292.4 248 56.5
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 4.6e-77 292.4 239 58.6
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 3.9e-76 289.3 252 57.1
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 6.6e-76 288.5 226 60.2
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 1.1e-75 287.7 240 58.3
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.5e-75 287.3 253 55.7
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 2.5e-75 286.6 244 57.8
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 4.3e-75 285.8 240 57.5
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 7.3e-75 285.0 242 55.8
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 1.2e-74 284.3 242 55.8
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 2.1e-74 283.5 226 61.5
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 2.1e-74 283.5 251 56.2
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 1.1e-73 281.2 250 55.6
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 3.1e-73 279.6 225 61.8
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 8.9e-73 278.1 241 56.8
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 1.2e-72 277.7 241 53.5
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 4.9e-71 272.3 205 67.3
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 6.4e-71 271.9 217 61.3
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.1e-70 271.2 258 51.9
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 1.4e-70 270.8 252 54.0
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 2.4e-70 270.0 228 58.3
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 5.4e-70 268.9 267 52.1
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 1.6e-69 267.3 277 49.1
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.6e-69 267.3 264 51.1
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.6e-69 267.3 235 55.7
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 2.7e-69 266.5 227 57.3
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 7.8e-69 265.0 217 58.5
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 1.7e-68 263.8 236 56.4
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 3.0e-68 263.1 249 52.6
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 3.9e-68 262.7 243 52.7
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 3.9e-68 262.7 253 51.8
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 8.6e-68 261.5 235 52.8
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 1.1e-67 261.2 241 53.1
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 1.9e-67 260.4 254 52.0
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 2.5e-67 260.0 241 52.7
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 3.3e-67 259.6 242 53.3
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 3.3e-67 259.6 253 51.0
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 1.6e-66 257.3 236 53.8
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 2.1e-66 256.9 234 53.8
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 4.7e-66 255.8 235 54.0
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 4.7e-66 255.8 235 53.2
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 8.1e-66 255.0 227 54.6
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 8.1e-66 255.0 236 53.4
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 1.4e-65 254.2 227 55.5
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 5.2e-65 252.3 236 52.1
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 5.2e-65 252.3 236 52.1
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 8.9e-65 251.5 230 55.2
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 1.2e-64 251.1 227 53.3
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 1.5e-64 250.8 227 53.7
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 1.5e-64 250.8 227 53.7
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 2.0e-64 250.4 232 53.9
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 2.0e-64 250.4 227 53.3
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 2.0e-64 250.4 227 53.3
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 3.4e-64 249.6 227 53.3
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 4.4e-64 249.2 227 53.3
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 4.4e-64 249.2 236 51.3
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.4e-64 249.2 251 48.2
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 5.8e-64 248.8 227 54.2
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 5.8e-64 248.8 227 53.3
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 5.8e-64 248.8 227 54.2
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 9.9e-64 248.1 227 52.9
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 9.9e-64 248.1 227 52.9
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 1.7e-63 247.3 246 50.4
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.9e-63 246.5 227 53.7
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.9e-63 246.5 227 53.7
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.9e-63 246.5 240 47.5
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 3.8e-63 246.1 240 51.7
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 3.8e-63 246.1 227 53.3
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 4.9e-63 245.7 241 52.3
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 1.4e-62 244.2 227 53.3
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 1.4e-62 244.2 272 47.1
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 5.4e-62 242.3 248 49.2
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 9.2e-62 241.5 238 49.2
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 3.5e-61 239.6 227 52.0
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.5e-61 239.6 227 50.7
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 4.6e-61 239.2 227 50.7
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 1.1e-59 234.6 223 52.0
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.5e-59 233.4 227 51.5
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 7.3e-59 231.9 231 51.5
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 9.6e-59 231.5 236 50.0
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 1.2e-58 231.1 227 48.9
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 1.6e-58 230.7 227 51.5
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 1.4e-57 227.6 246 50.0
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 9.0e-57 224.9 228 50.0
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.7e-55 220.7 197 60.4
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 2.9e-55 219.9 203 52.7
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 3.8e-55 219.5 201 51.7
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 1.2e-53 214.5 228 48.2
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 1.2e-53 214.5 228 48.2
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 1.2e-53 214.5 228 48.2
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 2.7e-53 213.4 223 48.9
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 1.1e-51 208.0 228 47.4
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 1.1e-51 208.0 228 47.4
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 1.5e-51 207.6 183 57.9
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 4.3e-51 206.1 252 42.1
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 7.3e-51 205.3 241 45.6
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.6e-50 204.1 212 50.9
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 1.4e-49 201.1 235 44.7
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 9.0e-49 198.4 225 44.4
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 3.4e-48 196.4 245 40.4
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 2.2e-47 193.7 212 49.1
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 2.9e-47 193.4 213 48.4
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 1.9e-46 190.7 232 45.3
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 8.7e-44 181.8 242 41.7
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 4.3e-43 179.5 186 51.6
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 1.7e-39 167.5 227 39.2
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 1.9e-38 164.1 165 49.1
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 2.1e-37 160.6 165 51.5
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.4e-33 147.1 107 62.6
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 7.6e-32 142.1 261 36.4
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 1.3e-31 141.4 254 34.6
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 8.4e-31 138.7 84 75.0
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 2.7e-29 133.7 220 38.2
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-28 131.3 263 34.2
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 1.3e-28 131.3 86 65.1
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 1.8e-28 131.0 220 37.7
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 3.0e-28 130.2 219 34.7
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.1e-27 128.3 105 60.0
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 3.3e-27 126.7 228 38.2
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.0e-24 117.5 82 59.8
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.3e-23 114.8 87 56.3
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 8.5e-23 112.1 184 37.0
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 9.4e-22 108.6 75 65.3
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 5.1e-20 102.8 74 63.5
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 3.3e-19 100.1 223 32.7
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 3.3e-19 100.1 64 65.6
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 7.4e-19 99.0 141 40.4
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 3.1e-17 93.6 67 62.7
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.9e-15 87.0 59 64.4
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 8.5e-15 85.5 59 61.0
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 1.5e-11 74.7 42 78.6
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 3.1e-09 67.0 196 29.1
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 1.5e-08 64.7 45 60.0
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 2.2e-07 60.8 47 57.4
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 2.2e-07 60.8 47 57.4


User provided reference genes

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