Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 5.2e-93 344.4 171 100.0
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 3.6e-62 241.9 184 69.6
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 2.4e-58 229.2 161 72.7
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 9.2e-58 227.3 183 63.4
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.3e-56 223.4 179 65.9
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.3e-56 222.6 151 69.5
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.3e-56 222.6 174 64.4
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 5.1e-56 221.5 151 68.9
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 8.6e-56 220.7 152 69.7
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.9e-55 219.5 151 64.9
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 5.6e-55 218.0 152 67.8
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.2e-54 216.9 171 64.3
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.2e-54 216.9 152 66.4
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.6e-54 216.5 169 62.7
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.8e-54 215.7 154 64.9
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 6.2e-54 214.5 166 61.4
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 3.1e-53 212.2 176 60.2
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 5.2e-53 211.5 148 65.5
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 8.9e-53 210.7 151 64.2
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 8.9e-53 210.7 151 64.9
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.2e-52 210.3 151 63.6
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.2e-52 210.3 151 64.9
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.2e-52 210.3 152 66.4
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.2e-52 210.3 151 62.3
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 3.4e-52 208.8 151 62.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 4.4e-52 208.4 181 56.9
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 7.6e-52 207.6 165 59.4
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 7.6e-52 207.6 163 60.1
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 9.9e-52 207.2 165 60.6
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.7e-51 206.5 171 59.6
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 2.2e-51 206.1 151 64.9
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 4.9e-51 204.9 151 63.6
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 4.9e-51 204.9 151 62.3
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 4.9e-51 204.9 151 62.9
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 4.9e-51 204.9 151 64.2
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.4e-51 204.5 163 60.1
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.4e-51 204.5 163 60.1
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.1e-50 203.8 163 60.1
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 1.1e-50 203.8 151 62.9
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.1e-50 203.8 151 60.3
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 1.4e-50 203.4 148 63.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.9e-50 203.0 163 60.1
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.9e-50 203.0 151 63.6
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.9e-50 203.0 151 60.9
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 4.1e-50 201.8 151 62.9
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 5.4e-50 201.4 157 58.6
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 5.4e-50 201.4 174 60.9
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 5.4e-50 201.4 151 61.6
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 5.4e-50 201.4 177 55.4
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 7.1e-50 201.1 169 56.8
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 7.1e-50 201.1 153 62.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.2e-49 200.3 153 64.1
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.6e-49 199.9 151 62.9
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.1e-49 199.5 151 62.3
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.1e-49 199.5 150 59.3
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 2.7e-49 199.1 157 58.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.5e-49 198.7 151 59.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 4.6e-49 198.4 147 61.2
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.3e-48 196.8 151 60.9
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.3e-48 196.8 170 53.5
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.3e-48 196.8 151 60.3
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 2.3e-48 196.1 157 59.9
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 2.3e-48 196.1 163 58.3
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 3.0e-48 195.7 151 62.3
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 3.9e-48 195.3 181 52.5
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 5.1e-48 194.9 157 59.2
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 5.1e-48 194.9 157 59.2
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 5.1e-48 194.9 157 57.3
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 5.1e-48 194.9 151 57.0
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 8.6e-48 194.1 149 61.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 8.6e-48 194.1 149 56.4
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.1e-47 193.7 150 57.3
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.5e-47 193.4 150 56.7
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.9e-47 193.0 146 57.5
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 3.3e-47 192.2 163 57.1
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.3e-47 192.2 146 56.8
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 7.3e-47 191.0 147 57.8
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 7.3e-47 191.0 169 53.8
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 9.6e-47 190.7 172 53.5
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.6e-47 190.7 151 56.3
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 2.1e-46 189.5 178 55.1
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 2.8e-46 189.1 179 54.7
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 3.6e-46 188.7 179 54.7
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 3.6e-46 188.7 174 54.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 4.7e-46 188.3 146 58.2
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 8.1e-46 187.6 150 54.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 8.1e-46 187.6 146 55.5
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.4e-45 186.8 165 55.8
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.4e-45 186.8 151 58.9
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.8e-45 186.4 148 56.1
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.8e-45 186.4 173 53.2
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 2.4e-45 186.0 151 55.0
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.4e-45 186.0 150 54.0
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 2.4e-45 186.0 152 57.9
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 3.1e-45 185.7 166 51.8
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 5.2e-45 184.9 167 54.5
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 8.9e-45 184.1 152 55.9
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 8.9e-45 184.1 150 52.7
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 8.9e-45 184.1 150 54.0
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.2e-44 183.7 193 49.7
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 3.4e-44 182.2 179 54.2
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.8e-44 181.4 150 55.3
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 9.9e-44 180.6 145 55.2
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 2.2e-43 179.5 148 56.1
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 2.9e-43 179.1 151 53.6
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 2.9e-43 179.1 183 47.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 2.9e-43 179.1 183 50.3
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 4.9e-43 178.3 150 52.0
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 4.9e-43 178.3 150 51.3
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 4.2e-42 175.3 154 52.6
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 4.2e-34 148.7 146 54.1
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.3e-32 142.9 148 44.6
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.6e-32 141.4 152 42.8
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.6e-32 141.4 152 42.8
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 3.3e-31 139.0 174 43.7
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 3.4e-28 129.0 160 40.6
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 2.4e-26 122.9 82 69.5
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 7.1e-26 121.3 82 65.9
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.0e-24 117.5 82 63.4
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 5.6e-23 111.7 82 59.8
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 7.4e-23 111.3 82 57.3
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 9.6e-23 110.9 108 50.0
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 4.8e-22 108.6 105 52.4
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 1.5e-20 103.6 69 71.0
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 7.6e-20 101.3 72 63.9
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 6.5e-19 98.2 69 65.2
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.1e-17 93.2 72 61.1
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.9e-15 86.7 64 59.4
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.6e-14 83.6 143 30.1
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.2e-14 81.3 99 42.4
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 3.4e-12 75.9 150 25.3
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 5.0e-11 72.0 58 58.6
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 2.5e-10 69.7 72 40.3
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 2.7e-09 66.2 44 61.4


User provided reference genes

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