Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.1e-181 639.8 324 100.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.1e-72 277.7 370 51.1
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 2.5e-72 276.6 370 49.5
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 2.4e-67 260.0 358 48.6
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 5.1e-65 252.3 362 48.3
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 1.4e-59 234.2 355 47.0
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 1.5e-56 224.2 353 44.8
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 2.3e-49 200.3 374 40.6
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.5e-48 197.6 391 39.6
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.5e-45 187.6 370 39.2
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 7.1e-43 178.7 352 39.8
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.7e-42 176.8 361 36.6
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.1e-38 164.9 356 36.5
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.4e-38 164.5 368 35.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.8e-38 164.1 373 36.2
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 9.0e-38 161.8 348 39.7
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.7e-34 150.2 368 35.6
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.1e-27 128.3 344 33.4
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.4e-27 127.9 385 31.4
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 5.5e-27 125.9 298 37.2
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.2e-26 124.8 367 32.2
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.3e-25 120.6 388 32.7
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.1e-22 110.2 391 30.4
arahy.Tifrunner.gnm1.ann1.34G3CR Arachis hypogaea HOM05D032995 ORTHO05D031506 4.1e-22 109.8 328 33.2
arahy.Tifrunner.gnm1.ann1.E4Y0Z3 Arachis hypogaea HOM05D032995 ORTHO05D031506 1.2e-21 108.2 332 33.4
arahy.Tifrunner.gnm1.ann1.I6QTPS Arachis hypogaea HOM05D032995 ORTHO05D031506 1.5e-21 107.8 328 33.2
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 2.0e-21 107.5 371 31.8
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.0e-20 105.1 363 30.6
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.3e-20 104.8 367 31.9
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 5.0e-20 102.8 388 31.7
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.1e-19 101.7 354 26.6
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 7.2e-19 99.0 370 30.0
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 9.4e-19 98.6 360 28.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 9.4e-19 98.6 361 28.3
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.1e-18 97.4 311 28.9
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 2.7e-18 97.1 357 29.7
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 2.7e-18 97.1 357 29.7
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.7e-18 97.1 369 31.2
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 6.1e-18 95.9 371 27.5
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-17 94.4 385 30.9
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 2.3e-17 94.0 356 27.5
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.9e-17 93.2 357 30.0
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.9e-17 93.2 404 28.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 3.9e-17 93.2 346 28.9
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 5.1e-17 92.8 372 28.2
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.1e-17 92.8 378 28.6
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.1e-16 91.7 351 30.8
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.5e-16 91.3 353 29.2
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 2.0e-16 90.9 377 27.9
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.3e-16 90.1 354 29.9
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 7.4e-16 89.0 363 32.0
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 9.7e-16 88.6 355 29.3
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.3e-15 88.2 371 26.1
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.3e-15 88.2 376 27.1
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.7e-15 87.8 363 31.1
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.8e-14 84.3 395 28.4
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 3.1e-14 83.6 348 29.6
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.1e-14 83.2 366 31.1
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 4.1e-14 83.2 356 29.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.3e-14 82.8 354 29.1
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.5e-13 81.3 347 28.0
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.0e-13 80.9 355 28.7
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.6e-13 80.5 351 30.8
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 2.6e-13 80.5 346 29.8
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 3.4e-13 80.1 392 26.3
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.4e-13 80.1 354 27.1
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.0e-12 78.6 363 27.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 8.5e-12 75.5 348 27.3
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.1e-11 75.1 338 27.2
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 1.4e-11 74.7 157 37.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.4e-11 74.7 344 28.2
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.9e-11 74.3 387 25.8
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.2e-11 73.2 344 27.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 4.2e-11 73.2 289 28.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 7.2e-11 72.4 352 27.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 7.2e-11 72.4 344 27.0
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.2e-11 72.4 344 27.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.6e-10 71.2 355 26.5
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.7e-10 70.5 366 26.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.6e-10 70.1 351 26.8
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.4e-09 68.2 360 26.9
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.3e-09 67.4 363 23.7
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 3.0e-09 67.0 335 26.9
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 3.9e-09 66.6 344 26.5
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 5.1e-09 66.2 277 26.0
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 2.0e-08 64.3 325 27.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 3.3e-08 63.5 354 26.8
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.3e-08 63.5 370 23.2
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 3.3e-08 63.5 388 23.7
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.3e-07 61.6 280 27.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 2.8e-07 60.5 341 26.7
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.7e-07 60.1 166 33.7
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 4.8e-07 59.7 359 25.3
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.4e-06 58.2 141 33.3
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.4e-06 57.4 367 22.9
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.1e-06 57.0 341 23.2


User provided reference genes

Program Settings