Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 6.3e-225 783.9 420 100.0
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 3.9e-174 615.1 420 78.3
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.6e-170 602.4 425 78.6
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 2.4e-168 595.9 416 78.1
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 3.6e-164 582.0 431 75.2
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 8.1e-164 580.9 426 77.5
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 6.4e-161 571.2 421 74.6
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 3.2e-160 568.9 425 74.1
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.5e-138 495.4 426 62.4
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 9.3e-136 487.6 421 63.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.6e-135 485.3 430 62.1
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.8e-134 483.4 412 62.6
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 2.5e-133 479.6 425 63.1
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 2.1e-132 476.5 428 61.7
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 4.8e-132 475.3 421 62.0
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 8.1e-132 474.6 427 61.6
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 3.1e-131 472.6 337 70.3
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 1.2e-130 470.7 451 59.0
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 2.0e-130 469.9 424 61.8
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 2.6e-130 469.5 423 61.5
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 5.8e-130 468.4 424 62.3
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 3.8e-129 465.7 403 63.3
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 4.9e-129 465.3 421 62.0
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 1.1e-128 464.2 422 60.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 2.4e-128 463.0 426 61.0
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.4e-128 463.0 426 61.0
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 4.2e-128 462.2 362 67.4
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 2.1e-127 459.9 357 66.4
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.7e-127 459.5 426 60.8
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 3.5e-127 459.1 418 60.0
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 7.9e-127 458.0 407 62.4
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 8.7e-126 454.5 435 59.5
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 5.6e-125 451.8 425 58.6
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 9.6e-125 451.1 357 64.7
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.1e-124 449.9 368 65.8
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 2.1e-124 449.9 287 84.7
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.1e-123 447.6 401 60.6
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-123 446.8 383 63.4
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 2.4e-123 446.4 425 58.4
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.3e-123 445.3 400 62.2
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 9.0e-123 444.5 419 58.0
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 7.6e-122 441.4 411 59.9
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 2.9e-121 439.5 336 65.2
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.9e-121 439.5 347 67.4
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.9e-120 436.8 359 64.1
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 1.9e-120 436.8 334 67.1
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 4.2e-120 435.6 426 57.7
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 5.5e-120 435.3 412 57.5
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 7.1e-120 434.9 356 65.7
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 3.5e-119 432.6 428 58.2
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 3.3e-117 426.0 412 57.8
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 4.3e-117 425.6 433 58.2
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 4.3e-117 425.6 498 52.0
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 5.7e-117 425.2 370 61.6
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 9.7e-117 424.5 422 57.1
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 2.8e-116 422.9 368 60.3
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 2.8e-116 422.9 531 52.5
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.8e-116 422.2 437 56.5
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 2.4e-115 419.9 317 68.1
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 4.1e-115 419.1 351 61.8
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 9.0e-115 417.9 356 60.4
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 1.2e-114 417.5 403 57.1
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 1.2e-114 417.5 403 57.1
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 7.6e-114 414.8 352 61.1
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 7.6e-114 414.8 352 61.1
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 1.1e-112 411.0 424 54.2
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 3.2e-112 409.5 353 61.2
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 2.1e-111 406.8 338 61.5
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 3.6e-111 406.0 351 60.7
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 1.0e-110 404.4 360 58.3
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.8e-110 401.4 450 52.2
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.3e-109 399.4 327 60.9
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 1.7e-108 397.1 334 61.7
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 2.8e-108 396.4 377 59.4
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 8.2e-108 394.8 393 54.7
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.5e-106 389.0 405 54.1
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 1.3e-105 387.5 340 59.1
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 1.4e-104 384.0 390 53.6
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.8e-102 377.1 300 66.7
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-101 373.6 313 62.6
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 2.9e-97 359.8 454 47.4
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.9e-97 359.8 339 55.2
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 3.2e-96 356.3 387 53.5
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 7.2e-96 355.1 325 59.1
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 9.4e-96 354.8 340 54.7
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 7.4e-93 345.1 326 59.8
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.7e-92 344.0 329 56.5
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.4e-91 340.1 367 53.7
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 7.5e-85 318.5 281 61.2
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 5.3e-83 312.4 291 59.8
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.7e-82 310.1 402 46.8
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 1.6e-74 284.3 280 56.1
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.1e-72 278.1 268 58.2
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.1e-72 278.1 347 47.8
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 9.8e-69 265.0 236 58.5
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 1.7e-68 264.2 209 65.6
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 1.8e-67 260.8 242 59.9
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.2e-66 258.1 395 41.8
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 1.3e-65 254.6 262 54.6
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 2.3e-65 253.8 213 61.0
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.5e-64 251.1 420 41.2
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 1.3e-60 238.0 209 57.9
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 7.8e-58 228.8 241 58.5
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 3.0e-57 226.9 329 40.4
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 2.5e-56 223.8 152 82.2
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 5.6e-56 222.6 327 41.3
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 2.2e-52 210.7 314 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 6.4e-52 209.1 253 47.0
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.5e-48 198.0 161 70.2
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 9.5e-48 195.3 228 51.3
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.2e-47 194.9 235 50.6
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 4.0e-46 189.9 333 36.6
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 4.0e-46 189.9 163 63.2
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 5.8e-45 186.0 219 53.4
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 2.2e-44 184.1 195 51.8
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 9.5e-40 168.7 116 75.0
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.8e-39 167.2 346 36.1
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 1.8e-38 164.5 345 34.8
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 7.6e-37 159.1 190 45.8
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-36 157.9 204 41.7
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 3.8e-36 156.8 125 64.0
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.4e-35 154.1 357 32.5
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 4.3e-32 143.3 360 30.3
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.3e-32 142.5 351 29.6
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 9.6e-32 142.1 338 30.5
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.2e-31 141.7 402 29.6
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.3e-30 136.3 124 63.7
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.5e-29 134.8 112 62.5
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 4.4e-29 133.3 102 70.6
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 2.2e-28 131.0 104 67.3
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.4e-27 128.3 82 81.7
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 2.1e-26 124.4 117 62.4
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.5e-24 118.2 84 66.7
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.8e-22 111.3 105 50.5
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.4e-22 110.9 103 60.2
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.5e-21 108.2 166 42.2
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 9.9e-21 105.5 83 74.7
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 4.2e-19 100.1 80 65.0
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 1.3e-17 95.1 133 42.1
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 2.8e-15 87.4 66 63.6
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 6.2e-15 86.3 81 55.6
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.1e-14 84.0 53 79.2
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.1e-14 84.0 79 51.9
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 5.8e-13 79.7 119 39.5
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 9.9e-13 79.0 64 59.4
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 8.4e-12 75.9 59 69.5
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 7.1e-11 72.8 62 59.7
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 9.3e-11 72.4 57 59.6
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 7.9e-10 69.3 75 45.3
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 3.0e-09 67.4 158 30.4
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.1e-09 66.6 55 61.8
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 2.5e-08 64.3 380 22.9
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 7.4e-08 62.8 244 21.7
Mapoly0050s0070 Marchantia polymorpha HOM05D000943 ORTHO05D008314 3.7e-07 60.5 308 26.0
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 4.0e-06 57.0 35 74.3
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 9.0e-06 55.8 77 46.8


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