Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 3.3e-141 505.0 244 100.0
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 2.2e-36 156.8 105 78.1
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.7e-33 147.1 105 70.5
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 5.0e-33 145.6 105 70.5
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 5.0e-33 145.6 105 68.6
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 8.6e-33 144.8 105 68.6
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 8.6e-33 144.8 105 68.6
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 2.5e-32 143.3 105 69.5
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 4.7e-31 139.0 105 66.7
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 6.1e-31 138.7 105 65.7
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 8.0e-31 138.3 105 64.8
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 8.0e-31 138.3 105 65.7
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.0e-30 137.9 105 65.7
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 1.0e-30 137.9 105 65.7
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.4e-30 137.5 105 64.8
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.8e-30 137.1 105 63.8
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.8e-30 137.1 105 65.7
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.8e-30 137.1 105 65.7
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.3e-30 136.7 104 65.4
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 2.3e-30 136.7 105 65.7
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 3.1e-30 136.3 105 65.7
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 4.0e-30 136.0 105 64.8
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 4.0e-30 136.0 105 63.8
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 6.8e-30 135.2 105 62.9
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 8.9e-30 134.8 105 62.9
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 8.9e-30 134.8 105 63.8
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 8.9e-30 134.8 105 62.9
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 8.9e-30 134.8 105 64.8
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.2e-29 134.4 104 63.5
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 1.2e-29 134.4 105 62.9
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 1.5e-29 134.0 105 61.9
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.5e-29 134.0 105 61.9
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 1.5e-29 134.0 105 61.9
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 2.6e-29 133.3 105 63.8
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.6e-29 133.3 105 62.9
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 2.6e-29 133.3 105 61.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 3.4e-29 132.9 105 61.9
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 3.4e-29 132.9 105 62.9
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.4e-29 132.9 96 66.7
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 3.4e-29 132.9 105 64.8
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 4.4e-29 132.5 105 61.0
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 5.8e-29 132.1 105 62.9
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 7.5e-29 131.7 105 61.9
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 9.8e-29 131.3 105 60.0
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 9.8e-29 131.3 105 60.0
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 9.8e-29 131.3 105 61.0
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.3e-28 131.0 105 61.0
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.3e-28 131.0 105 61.9
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.3e-28 131.0 105 61.9
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.3e-28 131.0 105 61.0
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 1.3e-28 131.0 105 61.9
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 61.9
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-28 130.6 105 60.0
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 2.2e-28 130.2 105 61.9
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 2.2e-28 130.2 105 61.9
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 2.2e-28 130.2 105 61.0
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.2e-28 130.2 105 61.9
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.9e-28 129.8 105 61.9
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 2.9e-28 129.8 105 61.9
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 3.7e-28 129.4 105 61.0
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 3.7e-28 129.4 105 61.0
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 6.4e-28 128.6 105 61.0
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 6.4e-28 128.6 131 53.4
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 6.4e-28 128.6 105 60.0
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 1.1e-27 127.9 105 59.0
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 1.1e-27 127.9 105 61.0
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 1.1e-27 127.9 105 60.0
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 1.1e-27 127.9 105 60.0
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.4e-27 127.5 105 61.0
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 1.4e-27 127.5 105 59.0
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 60.0
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 60.0
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 60.0
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 60.0
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 59.0
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.9e-27 127.1 105 59.0
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 4.1e-27 125.9 105 60.0
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 4.1e-27 125.9 105 60.0
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 5.4e-27 125.6 105 60.0
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 5.4e-27 125.6 105 60.0
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 7.0e-27 125.2 105 56.2
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 7.0e-27 125.2 105 60.0
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 9.2e-27 124.8 105 59.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.2e-26 124.4 105 58.1
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 1.2e-26 124.4 105 56.2
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 1.6e-26 124.0 105 59.0
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 1.6e-26 124.0 105 60.0
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 2.0e-26 123.6 101 62.4
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 2.0e-26 123.6 105 58.1
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 3.5e-26 122.9 105 60.0
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 1.3e-25 120.9 105 57.1
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 2.3e-25 120.2 105 55.2
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 2.3e-25 120.2 105 57.1
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 5.0e-25 119.0 105 56.2
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.5e-24 116.7 105 57.1
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 2.1e-23 113.6 64 79.7
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 3.6e-23 112.8 105 53.3
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.0e-21 107.1 105 51.4
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 4.6e-18 95.9 105 41.9
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 2.3e-17 93.6 105 49.5
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 5.1e-17 92.4 108 46.3
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 6.6e-17 92.0 108 45.4
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 8.6e-17 91.7 92 53.3
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.1e-16 91.3 105 48.6
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 3.3e-16 89.7 108 44.4
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 1.6e-15 87.4 105 42.9
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 4.0e-14 82.8 104 41.3
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.9e-11 73.9 72 56.9
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.4e-11 73.6 105 46.7
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.1e-10 70.5 72 54.2
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 3.5e-10 69.7 105 36.2
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.0e-09 66.6 105 42.9
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 3.9e-09 66.2 105 40.0
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.1e-06 58.2 132 32.6


User provided reference genes

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