Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 2.3e-116 422.2 206 100.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 7.9e-80 300.8 173 85.0
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.0e-79 300.4 175 81.7
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 3.0e-79 298.9 175 81.7
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 3.0e-79 298.9 174 86.2
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.9e-73 279.6 189 73.0
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 4.2e-73 278.5 173 78.0
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 7.9e-72 274.2 204 69.1
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.9e-70 269.6 196 67.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 7.4e-70 267.7 165 79.4
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.3e-68 261.5 169 72.8
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 2.6e-67 259.2 169 73.4
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 3.4e-67 258.8 173 70.5
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 5.9e-67 258.1 170 73.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.0e-66 257.3 173 69.4
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 8.5e-66 254.2 169 72.8
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.4e-65 253.4 171 71.9
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.9e-65 253.1 173 71.1
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.9e-65 253.1 171 71.3
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 3.2e-65 252.3 169 71.6
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 5.5e-65 251.5 171 69.6
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 7.2e-65 251.1 173 70.5
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 9.4e-65 250.8 160 74.4
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 9.4e-65 250.8 168 73.2
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.2e-64 250.4 174 70.7
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.7e-64 249.2 173 72.8
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 4.6e-64 248.4 169 68.6
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.8e-63 246.5 179 69.3
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.3e-63 246.1 167 70.1
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.1e-62 243.8 170 68.8
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.1e-62 243.8 172 69.2
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.0e-62 243.0 169 67.5
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.6e-62 242.7 173 68.8
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 2.6e-62 242.7 171 67.3
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.4e-62 241.9 168 69.6
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 5.7e-62 241.5 173 67.1
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 7.4e-62 241.1 169 68.6
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 7.4e-62 241.1 154 73.4
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 9.7e-62 240.7 193 59.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 9.7e-62 240.7 182 67.0
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 9.7e-62 240.7 176 67.6
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.3e-61 240.4 168 69.0
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.8e-61 239.2 171 67.8
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 3.7e-61 238.8 169 66.9
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.8e-61 238.4 168 68.5
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 6.3e-61 238.0 170 68.8
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.1e-60 237.3 171 66.7
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.4e-60 236.9 173 66.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.4e-60 236.9 175 66.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.1e-60 235.7 179 63.7
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.1e-60 235.7 179 63.7
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 3.1e-60 235.7 166 69.3
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 5.3e-60 235.0 159 67.9
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 5.3e-60 235.0 174 66.1
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.5e-59 233.4 166 70.5
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.5e-59 233.4 156 69.9
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 2.0e-59 233.0 156 69.9
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.6e-59 232.6 160 68.1
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 2.6e-59 232.6 169 64.5
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.4e-59 232.3 176 63.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 7.7e-59 231.1 179 62.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 7.7e-59 231.1 171 64.9
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.0e-58 230.7 154 70.1
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.0e-58 230.7 156 69.2
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.0e-58 230.7 157 70.7
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.3e-58 230.3 156 69.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 2.2e-58 229.6 181 62.4
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.9e-58 229.2 173 62.4
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.9e-58 229.2 178 65.2
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.9e-58 229.2 171 65.5
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 3.8e-58 228.8 158 67.7
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 5.0e-58 228.4 156 68.6
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 5.0e-58 228.4 203 57.1
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 6.5e-58 228.0 159 67.3
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 8.5e-58 227.6 159 66.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 8.5e-58 227.6 159 66.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 8.5e-58 227.6 170 67.1
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 7.2e-57 224.6 156 64.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.6e-56 223.4 164 65.9
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 2.1e-56 223.0 164 65.9
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 6.1e-56 221.5 166 62.7
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.4e-55 220.3 169 63.3
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 2.3e-55 219.5 178 59.0
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 7.4e-54 214.5 156 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.0e-51 206.5 156 61.5
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 4.5e-51 205.3 154 63.6
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.2e-50 203.0 156 60.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 5.0e-50 201.8 149 65.8
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 8.5e-50 201.1 137 70.8
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 9.4e-49 197.6 141 67.4
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.4e-47 193.7 151 63.6
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.3e-47 193.0 118 76.3
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 4.0e-47 192.2 158 60.1
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.0e-46 189.9 154 59.7
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 4.8e-45 185.3 120 72.5
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.0e-42 177.6 123 71.5
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.8e-42 175.6 152 59.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 3.2e-41 172.6 128 64.8
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.7e-40 169.5 138 60.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.1e-36 155.6 119 63.0
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 7.0e-28 128.3 173 43.4
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.5e-27 125.9 83 68.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 5.0e-26 122.1 80 75.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-20 104.4 123 48.8
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 2.0e-19 100.1 149 38.3
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 5.2e-15 85.5 90 56.7
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.5e-11 72.8 133 33.8
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 3.6e-08 62.8 52 55.8
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.4e-06 55.8 41 61.0


User provided reference genes

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