Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 8.7e-34 146.4 72 100.0
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 7.9e-19 96.7 73 68.5
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 4.3e-17 90.9 71 66.2
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 1.6e-16 89.0 68 72.1
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 3.1e-15 84.7 53 73.6
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 2.0e-14 82.0 100 48.0
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 2.6e-14 81.6 63 68.3
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 1.7e-13 79.0 80 60.0
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 1.7e-13 79.0 62 67.7
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 2.2e-13 78.6 65 63.1
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 3.8e-13 77.8 63 63.5
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 3.8e-13 77.8 65 64.6
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 5.0e-13 77.4 71 57.7
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 2.5e-12 75.1 55 67.3
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 4.2e-12 74.3 46 73.9
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 4.2e-12 74.3 68 63.2
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 4.2e-12 74.3 57 68.4
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 7.2e-12 73.6 50 70.0
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 7.2e-12 73.6 67 61.2
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 9.4e-12 73.2 40 82.5
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 1.6e-11 72.4 39 84.6
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 6.1e-11 70.5 65 60.0
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 6.1e-11 70.5 57 66.7
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 6.1e-11 70.5 57 66.7
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 1.0e-10 69.7 57 66.7
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 1.4e-10 69.3 65 63.1
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 2.3e-10 68.6 71 53.5
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 3.0e-10 68.2 54 64.8
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 8.8e-10 66.6 54 64.8
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 1.5e-09 65.9 61 59.0
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 4.3e-09 64.3 72 55.6
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 4.3e-09 64.3 54 63.0
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 1.3e-08 62.8 53 60.4
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 1.7e-08 62.4 60 56.7
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 3.7e-08 61.2 74 51.4
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 3.7e-08 61.2 47 68.1
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 6.3e-08 60.5 69 50.7
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.4e-07 59.3 59 59.3
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 1.8e-07 58.9 54 59.3
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.8e-07 58.9 68 51.5
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 2.4e-07 58.5 92 41.3
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 2.4e-07 58.5 76 51.3
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 4.1e-07 57.8 31 80.6
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 2.0e-06 55.5 54 55.6
FAN12G0383 Fragaria x ananassa HOM05D008456 ORTHO05D010229 4.5e-06 54.3 54 48.1
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 4.5e-06 54.3 54 53.7
Glyma.08G261450 Glycine max HOM05D035241 ORTHO05D035916 4.5e-06 54.3 60 50.0
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 4.5e-06 54.3 32 75.0
C02p24890 Brassica napus HOM05D011059 ORTHO05D010229 7.7e-06 53.5 38 65.8
BolC2t08582H Brassica oleracea HOM05D011059 ORTHO05D010229 7.7e-06 53.5 38 65.8
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 7.7e-06 53.5 58 46.6


User provided reference genes

Program Settings