Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.9e-89 332.4 162 100.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 4.5e-70 268.1 160 80.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.5e-67 258.5 160 75.6
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 7.9e-67 257.3 164 76.2
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.1e-65 253.4 162 75.9
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 3.1e-63 245.4 164 75.0
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.3e-61 240.0 164 71.3
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 8.4e-61 237.3 164 73.2
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 2.5e-60 235.7 163 71.2
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 2.5e-60 235.7 160 71.2
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 9.3e-60 233.8 163 70.6
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.6e-56 223.0 160 66.9
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 8.2e-56 220.7 163 66.3
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 3.1e-55 218.8 164 62.2
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 4.1e-55 218.4 158 65.8
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 6.9e-55 217.6 161 64.6
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.5e-54 214.9 160 64.4
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.0e-53 213.8 160 64.4
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.0e-53 213.8 164 62.2
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.2e-53 212.6 162 61.7
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.9e-53 212.2 160 63.8
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.9e-53 212.2 151 66.2
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 5.0e-53 211.5 162 61.7
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 8.4e-53 210.7 160 63.1
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 8.4e-53 210.7 151 64.2
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.9e-52 209.5 161 61.5
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.5e-52 209.1 144 70.1
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.5e-52 209.1 162 61.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.2e-52 208.8 155 68.4
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 5.5e-52 208.0 160 62.5
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 7.2e-52 207.6 151 67.5
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.6e-51 206.5 155 67.7
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.6e-51 206.5 158 65.8
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.7e-51 205.7 161 64.0
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.5e-51 205.3 163 63.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 6.1e-51 204.5 158 63.3
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 6.1e-51 204.5 161 62.7
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 7.9e-51 204.1 149 64.4
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.0e-50 203.8 161 60.9
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.3e-50 203.4 160 63.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.8e-50 203.0 158 63.3
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.3e-50 202.6 154 61.0
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.3e-50 202.6 148 65.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 2.3e-50 202.6 159 62.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 5.1e-50 201.4 152 63.8
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 5.1e-50 201.4 140 67.1
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.7e-50 201.1 147 66.0
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.5e-49 199.9 148 62.8
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 2.5e-49 199.1 148 62.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 3.3e-49 198.7 149 61.7
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 4.3e-49 198.4 142 66.2
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 5.7e-49 198.0 149 61.1
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 5.7e-49 198.0 158 60.1
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 7.4e-49 197.6 152 61.2
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 9.7e-49 197.2 149 63.1
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.3e-48 196.8 149 61.7
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.2e-48 196.1 149 64.4
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 2.8e-48 195.7 160 59.4
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 6.3e-48 194.5 149 61.1
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.1e-47 193.7 151 62.9
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 1.1e-47 193.7 139 64.7
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.4e-47 192.6 162 63.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 5.3e-47 191.4 151 62.3
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 6.9e-47 191.0 160 60.0
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.2e-46 190.3 150 62.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.5e-46 189.9 158 59.5
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.6e-46 189.1 141 63.1
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 2.2e-45 186.0 141 60.3
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.2e-45 186.0 140 61.4
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.8e-45 185.3 191 52.4
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 8.5e-45 184.1 155 54.8
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 2.5e-44 182.6 158 58.9
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.2e-44 182.2 152 56.6
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 3.2e-44 182.2 153 56.2
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 7.2e-44 181.0 140 62.9
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.6e-43 179.9 203 47.8
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.6e-43 179.9 154 55.8
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.1e-43 179.5 143 60.8
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.4e-42 176.8 170 51.2
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 5.1e-42 174.9 159 55.3
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 6.7e-42 174.5 147 59.2
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 4.1e-39 165.2 152 52.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.2e-38 163.7 144 53.5
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 4.4e-33 145.2 131 52.7
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.3e-29 133.7 110 53.6
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 5.0e-29 131.7 166 41.6
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.8e-24 115.9 70 75.7
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 6.3e-24 114.8 144 41.0
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.2e-22 110.5 97 51.5
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.0e-21 107.5 136 40.4
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 5.0e-21 105.1 64 84.4
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.0e-18 97.4 97 50.5
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.4e-17 92.4 71 60.6
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.2e-12 75.9 106 37.7
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 9.5e-12 74.3 60 55.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.7e-11 72.8 97 45.4
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 4.7e-11 72.0 97 43.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.4e-10 70.5 59 54.2


User provided reference genes

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