Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0022233 Lotus japonicus HOM05D000240 ORTHO05D002608 4.3e-44 181.0 97 100.0
Lj5g0023255 Lotus japonicus HOM05D000240 ORTHO05D002608 4.7e-43 177.6 95 98.9
Lj5g0010376 Lotus japonicus HOM05D000240 ORTHO05D002608 5.6e-36 154.1 95 88.4
arahy.Tifrunner.gnm1.ann1.IRA02K Arachis hypogaea HOM05D000240 ORTHO05D002608 3.0e-29 131.7 94 76.6
arahy.Tifrunner.gnm1.ann1.UY9GAA Arachis hypogaea HOM05D000240 ORTHO05D002608 1.9e-28 129.0 94 76.6
Medtr1g017540 Medicago truncatula HOM05D000240 ORTHO05D002608 3.4e-25 118.2 97 72.2
TPR.G13004 Trifolium pratense HOM05D000240 ORTHO05D002608 5.8e-25 117.5 95 69.5
Lalb_Chr14g0368061 Lupinus albus HOM05D000240 ORTHO05D002608 1.3e-24 116.3 95 69.5
Glyma.14G089072 Glycine max HOM05D000240 ORTHO05D002608 2.9e-24 115.2 95 73.7
Ca_06978_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002608 1.4e-23 112.8 97 70.1
VMungo0647G2543 Vigna mungo HOM05D000240 ORTHO05D002608 1.4e-23 112.8 95 68.4
Glyma.17G233200 Glycine max HOM05D000240 ORTHO05D002608 2.7e-22 108.6 95 72.6
Phvul.001G029600 Phaseolus vulgaris HOM05D000240 ORTHO05D002608 2.7e-22 108.6 95 68.4
GSVIVG01009305001 Vitis vinifera HOM05D000240 ORTHO05D002608 1.0e-13 80.1 124 47.6
QL12p038572 Quercus lobata HOM05D000240 ORTHO05D002608 2.8e-11 72.0 124 43.5
Atru.chr13.866 Acer truncatum HOM05D000240 ORTHO05D002608 6.9e-10 67.4 124 41.9
CiPaw.07G172400 Carya illinoinensis HOM05D000240 ORTHO05D002608 9.0e-10 67.0 120 43.3
Lj4A75G32 Lonicera japonica HOM05D000240 ORTHO05D002608 2.6e-09 65.5 124 41.1
Potri.014G013300 Populus trichocarpa HOM05D000240 ORTHO05D002608 4.5e-09 64.7 124 39.5
Thecc.08G085000 Theobroma cacao HOM05D000240 ORTHO05D002608 5.9e-09 64.3 124 42.7
Dinv44933 Davidia involucrata HOM05D000240 ORTHO05D002608 7.6e-09 63.9 124 42.7
Sabra14G0008100 Salix brachista HOM05D000240 ORTHO05D002608 1.7e-08 62.8 124 38.7
Eucgr.F02228 Eucalyptus grandis HOM05D000240 ORTHO05D002608 1.4e-07 59.7 114 37.7
CSS0016409 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D002608 2.5e-07 58.9 128 43.0
Cfa013743 Carpinus fangiana HOM05D000240 ORTHO05D002608 2.5e-07 58.9 53 66.0
Haze_22395 Corylus avellana HOM05D000240 ORTHO05D002608 2.5e-07 58.9 53 66.0
Haze_22403 Corylus avellana HOM05D000240 ORTHO05D002608 2.5e-07 58.9 53 66.0
MD15G1065700 Malus domestica HOM05D000240 ORTHO05D002608 2.5e-07 58.9 115 41.7
MSTRG.1017 Avicennia marina HOM05D000240 ORTHO05D002608 5.5e-07 57.8 49 65.3
TWI56G0102 Tripterygium wilfordii HOM05D000240 ORTHO05D002608 5.5e-07 57.8 124 41.1
MD08G1078700 Malus domestica HOM05D000240 ORTHO05D002608 1.6e-06 56.2 110 40.9
Gorai.010G027000 Gossypium raimondii HOM05D000240 ORTHO05D002608 2.1e-06 55.8 71 52.1
Cc10_g07590 Coffea canephora HOM05D000240 ORTHO05D002608 2.7e-06 55.5 108 40.7
Gohir.D06G022400 Gossypium hirsutum HOM05D000240 ORTHO05D002608 2.7e-06 55.5 71 52.1
Ciclev10027806m.g Citrus clementina HOM05D000240 ORTHO05D002608 3.6e-06 55.1 53 58.5
Gohir.D06G027000 Gossypium hirsutum HOM05D000240 ORTHO05D002608 3.6e-06 55.1 71 52.1
PGSC0003DMG400004917 Solanum tuberosum HOM05D000240 ORTHO05D002608 3.6e-06 55.1 123 39.0
Migut.C00475 Erythranthe guttata HOM05D000240 ORTHO05D002608 4.6e-06 54.7 49 59.2
Actinidia19586 Actinidia chinensis HOM05D000240 ORTHO05D018195 6.1e-06 54.3 54 55.6
SGA_v2.0_scaffold14G07077 Striga asiatica HOM05D000240 ORTHO05D002608 6.1e-06 54.3 124 37.1
vmacro04596 Vaccinium macrocarpon HOM05D000240 ORTHO05D002608 6.1e-06 54.3 124 38.7
Nitab4.5_0001426g0030 Nicotiana tabacum HOM05D000240 ORTHO05D002608 7.9e-06 53.9 70 51.4
Peaxi162Scf00340g00071 Petunia axillaris HOM05D000240 ORTHO05D002608 7.9e-06 53.9 53 60.4
PGR031G0176 Punica granatum HOM05D000240 ORTHO05D002608 7.9e-06 53.9 119 39.5


User provided reference genes

Program Settings