Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 4.7e-25 117.1 60 100.0
Medtr1g013350 Medicago truncatula HOM05D007824 ORTHO05D009875 3.9e-11 70.9 46 73.9
Glyma.14G104600 Glycine max HOM05D007824 ORTHO05D009875 8.6e-11 69.7 62 62.9
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 5.6e-10 67.0 62 64.5
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 5.6e-10 67.0 62 64.5
Psat6g024640 Pisum sativum HOM05D007824 ORTHO05D009875 1.6e-09 65.5 43 69.8
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 8.1e-09 63.2 62 56.5
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 8.1e-09 63.2 61 57.4
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 8.1e-09 63.2 47 66.0
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 1.8e-08 62.0 47 63.8
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 2.3e-08 61.6 66 57.6
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.1e-08 61.2 61 57.4
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 4.0e-08 60.8 60 55.0
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 4.0e-08 60.8 60 56.7
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 5.2e-08 60.5 60 55.0
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 5.2e-08 60.5 60 55.0
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 5.2e-08 60.5 60 56.7
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 5.2e-08 60.5 60 56.7
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 6.8e-08 60.1 52 63.5
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 8.9e-08 59.7 61 54.1
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 8.9e-08 59.7 61 55.7
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 8.9e-08 59.7 61 55.7
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.0e-07 58.5 60 51.7
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 2.6e-07 58.2 60 51.7
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 3.4e-07 57.8 61 55.7
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 3.4e-07 57.8 51 62.7
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 3.4e-07 57.8 60 53.3
Zm00001eb221680 Zea mays HOM05D007824 ORTHO05D009875 3.4e-07 57.8 37 75.7
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 5.8e-07 57.0 60 51.7
TPR.G38894 Trifolium pratense HOM05D007824 ORTHO05D009875 7.6e-07 56.6 66 50.0
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 9.9e-07 56.2 38 65.8
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 9.9e-07 56.2 38 65.8
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 9.9e-07 56.2 61 54.1
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 9.9e-07 56.2 61 49.2
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 1.3e-06 55.8 55 52.7
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 1.7e-06 55.5 51 60.8
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.7e-06 55.5 50 56.0
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 2.2e-06 55.1 61 50.8
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 2.2e-06 55.1 56 57.1
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 2.2e-06 55.1 61 52.5
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 2.9e-06 54.7 52 57.7
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 2.9e-06 54.7 52 59.6
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 3.7e-06 54.3 56 57.1
Os10g0478900 Oryza sativa ssp. japonica HOM05D007824 ORTHO05D009875 4.9e-06 53.9 36 69.4
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 6.4e-06 53.5 61 49.2


User provided reference genes

Program Settings