Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 0.0e+00 1757.3 927 100.0
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 0.0e+00 1374.0 937 79.5
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 0.0e+00 1369.8 934 79.0
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 0.0e+00 1364.0 866 81.6
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 0.0e+00 1351.3 931 77.3
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 0.0e+00 1338.9 938 77.2
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 0.0e+00 1335.1 930 76.6
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 0.0e+00 1333.9 938 77.3
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 0.0e+00 1260.0 868 77.1
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 0.0e+00 1223.8 990 68.4
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 0.0e+00 1210.7 849 77.1
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 0.0e+00 1085.1 865 66.0
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 0.0e+00 1077.4 871 66.4
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 0.0e+00 1076.2 904 63.7
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 0.0e+00 1076.2 868 66.5
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 8.2e-310 1067.0 903 62.8
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.1e-309 1066.6 871 64.6
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.8e-309 1065.8 925 62.2
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 2.0e-308 1062.4 904 63.4
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 2.6e-308 1062.0 903 62.6
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 4.5e-308 1061.2 907 63.9
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 7.2e-306 1053.9 864 65.9
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 3.6e-305 1051.6 864 65.6
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 5.1e-304 1047.7 861 65.0
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 1.5e-303 1046.2 931 61.5
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 7.4e-303 1043.9 869 64.8
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 2.8e-302 1042.0 864 64.2
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 5.9e-300 1034.2 870 63.7
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 1.0e-299 1033.5 868 64.1
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 1.7e-299 1032.7 865 63.1
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 3.8e-299 1031.6 863 64.3
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 4.2e-298 1028.1 866 62.7
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 7.2e-298 1027.3 936 60.3
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 1.6e-297 1026.2 874 63.7
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 4.7e-297 1024.6 864 62.8
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 2.3e-296 1022.3 925 60.4
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 1.1e-295 1020.0 928 60.5
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 2.0e-295 1019.2 883 63.0
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 2.0e-295 1019.2 874 63.0
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 3.3e-295 1018.5 897 62.4
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 1.3e-294 1016.5 925 60.6
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 2.4e-293 1012.3 861 62.5
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 7.7e-292 1007.3 909 60.5
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.4e-288 996.5 903 59.7
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 5.2e-288 994.6 870 60.3
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 2.6e-287 992.3 880 60.5
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 2.8e-286 988.8 876 59.9
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 1.8e-285 986.1 906 59.9
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 6.5e-283 977.6 919 59.5
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 5.5e-282 974.5 888 58.8
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 3.0e-280 968.8 865 59.4
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 6.8e-280 967.6 870 59.4
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 2.6e-279 965.7 901 56.9
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 9.8e-279 963.8 867 58.5
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 1.4e-277 959.9 941 57.2
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.3e-275 953.4 870 58.5
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 3.8e-275 951.8 867 58.9
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 6.5e-275 951.0 892 57.0
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 8.5e-275 950.7 869 58.9
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 1.1e-274 950.3 904 57.3
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 3.2e-274 948.7 863 57.9
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 5.5e-274 948.0 904 57.0
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 5.5e-274 948.0 867 58.7
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.6e-273 946.4 944 55.0
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 1.6e-273 946.4 889 56.4
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 1.6e-273 946.4 868 57.9
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 2.1e-273 946.0 888 56.4
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 4.7e-273 944.9 868 56.9
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 4.7e-273 944.9 905 57.2
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 8.8e-272 940.6 893 58.6
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 2.0e-271 939.5 939 55.9
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 7.5e-271 937.6 904 56.7
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 7.5e-271 937.6 904 56.7
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 2.4e-269 932.6 865 58.2
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 1.3e-267 926.8 910 55.4
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 1.0e-264 917.1 876 56.8
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 1.5e-263 913.3 866 56.0
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 2.9e-262 909.1 880 56.7
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 1.2e-260 903.7 909 55.3
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 4.6e-260 901.7 778 62.3
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 1.4e-256 890.2 863 56.5
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 9.8e-255 884.0 918 53.2
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 8.3e-254 880.9 755 62.1
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.7e-251 873.2 932 52.7
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 8.1e-249 864.4 898 53.3
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 9.8e-247 857.4 742 63.1
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 3.7e-246 855.5 881 52.8
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 4.1e-245 852.0 738 60.7
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 3.5e-244 849.0 867 54.1
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 1.6e-241 840.1 550 77.8
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 5.8e-239 831.6 877 52.9
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 7.3e-234 814.7 926 51.5
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 4.6e-228 795.4 664 64.0
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 4.0e-224 782.3 774 55.6
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 6.0e-220 768.5 806 52.9
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 3.8e-206 722.6 683 58.0
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 1.9e-194 683.7 550 64.4
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 1.7e-182 644.0 611 55.2
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 1.0e-179 634.8 895 43.2
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 1.7e-174 617.5 898 41.0
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 1.8e-171 607.4 905 41.2
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 8.8e-171 605.1 881 42.1
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 9.1e-168 595.1 716 51.5
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 1.5e-165 587.8 477 64.8
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 2.3e-155 553.9 806 45.5
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 2.2e-145 520.8 861 38.0
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 7.5e-130 469.2 484 57.2
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 7.3e-117 426.0 950 32.6
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 4.0e-115 420.2 322 69.9
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 7.1e-112 409.5 406 58.1
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 9.6e-109 399.1 380 57.6
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 2.4e-104 384.4 955 32.7
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.0e-102 379.0 348 56.3
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 8.7e-94 349.4 979 28.8
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 4.3e-93 347.1 323 56.3
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.3e-92 345.5 429 49.2
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 6.9e-91 339.7 303 57.8
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 2.0e-90 338.2 951 29.0
Cpa.g.c38803 Carica papaya HOM05D005096 ORTHO05D006566 3.1e-75 287.7 269 58.4
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 1.1e-69 269.2 481 41.2
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 4.1e-67 260.8 181 70.7
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 6.9e-67 260.0 256 55.1
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 1.7e-57 228.8 216 57.9
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 3.8e-57 227.6 401 41.9
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 3.6e-47 194.5 164 61.0
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.4e-46 192.6 194 54.1
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 1.2e-45 189.5 135 74.8
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 2.8e-44 184.9 275 41.1
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 3.5e-42 177.9 342 38.9
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 8.0e-39 166.8 132 64.4
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.7e-36 159.1 177 44.1
Glyma.18G167550 Glycine max HOM05D005096 ORTHO05D006566 2.7e-34 151.8 96 82.3
Cpa.g.sc370.1 Carica papaya HOM05D005096 ORTHO05D006566 1.4e-30 139.4 174 50.6
PGSC0003DMG400012881 Solanum tuberosum HOM05D005096 ORTHO05D006566 3.5e-26 124.8 146 47.9
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 2.3e-25 122.1 126 55.6
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 3.3e-24 118.2 97 62.9
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 4.6e-18 97.8 155 44.5
arahy.Tifrunner.gnm1.ann1.BB9JSJ Arachis hypogaea HOM05D000384 ORTHO05D000468 6.6e-17 94.0 139 46.8
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 1.1e-16 93.2 136 44.9
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 1.5e-16 92.8 372 28.5
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea HOM05D005096 ORTHO05D006566 3.1e-14 85.1 60 73.3
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 4.4e-13 81.3 48 79.2
SEGI_37612 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 2.9e-12 78.6 196 24.5
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.9e-11 75.9 78 53.8
MD11G1311300 Malus domestica HOM05D005096 ORTHO05D006566 3.5e-10 71.6 68 58.8
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.4e-06 59.7 113 36.3
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 3.1e-06 58.5 105 38.1


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