Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0021212 Lotus japonicus HOM05D012173 ORTHO05D004310 6.2e-89 331.3 235 100.0
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 9.7e-50 201.1 231 70.1
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 4.2e-45 185.7 232 72.8
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 8.2e-41 171.4 225 51.6
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 7.7e-39 164.9 222 71.2
Ca_10269_v3 Cicer arietinum L. HOM05D012173 ORTHO05D004310 2.5e-37 159.8 229 73.4
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 1.8e-35 153.7 243 55.6
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 3.0e-35 152.9 223 54.7
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 1.4e-32 144.1 221 49.8
Phvul.007G212700 Phaseolus vulgaris HOM05D012173 ORTHO05D004310 5.9e-31 138.7 226 65.0
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 1.0e-27 127.9 231 50.6
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 5.2e-11 72.4 233 37.3
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 7.5e-10 68.6 218 48.2
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea HOM05D012173 ORTHO05D004310 9.8e-10 68.2 212 43.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 9.8e-10 68.2 219 52.5
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 2.2e-09 67.0 214 39.3
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 8.3e-09 65.1 227 52.9
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.4e-08 64.3 219 52.1
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.4e-08 64.3 227 48.9
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea HOM05D012173 ORTHO05D004310 2.4e-08 63.5 60 58.3
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 7.0e-08 62.0 217 52.5
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 9.2e-08 61.6 219 53.0
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.0e-07 60.5 219 52.5
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 2.0e-07 60.5 219 52.5
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.0e-06 58.2 245 47.8
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 3.9e-06 56.2 217 52.1
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 5.0e-06 55.8 233 49.4
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 6.6e-06 55.5 220 34.5


User provided reference genes

Program Settings