Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.2e-283 977.2 459 100.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.2e-269 932.6 459 94.3
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.9e-268 927.9 459 93.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 9.4e-267 922.9 459 93.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.7e-263 912.1 459 91.9
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.8e-263 911.4 459 91.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.1e-262 909.4 459 91.5
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.4e-262 909.1 459 91.5
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 3.6e-258 894.4 459 89.8
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.0e-257 892.9 459 90.2
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.4e-257 892.5 459 89.8
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.0e-257 891.3 459 90.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 5.2e-257 890.6 460 89.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 8.9e-257 889.8 475 86.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.5e-256 889.0 459 90.0
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.5e-256 889.0 459 89.1
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.4e-256 887.5 461 90.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 4.4e-256 887.5 459 87.6
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.4e-256 887.5 459 89.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-254 882.9 459 88.5
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.8e-254 882.1 460 88.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.8e-254 882.1 459 88.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.8e-254 882.1 459 90.0
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.8e-254 882.1 459 88.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.4e-254 881.7 460 88.7
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.4e-254 881.7 459 87.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 7.0e-254 880.2 461 88.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 7.0e-254 880.2 459 88.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.5e-253 877.9 460 88.0
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.6e-253 877.5 461 88.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.3e-252 875.2 461 88.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.6e-252 873.6 461 88.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.1e-251 872.8 459 86.5
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 3.3e-251 871.3 459 86.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 4.3e-251 870.9 460 88.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.8e-250 868.2 461 87.2
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.6e-250 867.8 460 87.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.6e-250 867.8 460 87.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.0e-248 862.1 460 85.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.3e-247 859.4 481 83.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.4e-246 855.9 460 86.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.4e-246 855.1 459 86.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 6.0e-245 850.5 460 85.2
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 8.6e-244 846.7 497 80.9
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 4.3e-243 844.3 460 83.7
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.2e-242 842.8 460 83.9
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.8e-241 839.0 460 83.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.8e-241 839.0 460 83.5
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 3.1e-241 838.2 459 85.0
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.2e-241 837.4 460 82.6
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.6e-240 835.1 459 82.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.6e-240 835.1 460 83.5
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.4e-240 834.7 459 86.1
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 4.4e-240 834.3 459 82.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 7.5e-240 833.6 461 83.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 9.8e-240 833.2 459 82.1
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 9.8e-240 833.2 459 82.1
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.1e-237 825.5 461 82.9
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.3e-236 822.8 462 80.5
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.3e-236 822.8 459 83.0
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.6e-236 820.1 459 83.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.1e-235 819.7 458 81.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 5.6e-235 817.4 455 82.9
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.2e-234 816.2 459 80.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.1e-234 815.5 460 81.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 4.7e-234 814.3 459 80.6
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 4.7e-234 814.3 459 80.8
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 4.7e-234 814.3 459 80.6
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 5.2e-233 810.8 460 81.1
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.3e-231 806.2 459 82.4
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 2.2e-231 805.4 443 83.1
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.4e-231 803.5 459 79.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 8.4e-231 803.5 458 79.7
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.1e-230 801.2 459 79.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.0e-228 795.0 460 80.7
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.6e-228 793.9 486 75.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 8.6e-228 793.5 460 80.4
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 9.6e-227 790.0 459 77.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 5.4e-222 774.2 460 79.8
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.9e-219 765.8 459 76.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 5.6e-219 764.2 458 75.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.9e-215 751.1 459 74.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.1e-210 735.7 498 70.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.5e-203 713.0 459 72.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.3e-201 704.5 458 74.5
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.9e-195 686.0 341 94.1
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.9e-195 686.0 341 94.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 6.5e-191 671.0 392 77.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 8.5e-191 670.6 462 66.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.6e-189 665.2 451 65.9
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 4.3e-187 658.3 340 90.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.7e-187 657.9 451 66.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-184 650.2 338 90.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-182 643.7 456 63.4
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-182 642.9 336 89.3
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.2e-182 641.0 336 89.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-181 639.4 338 89.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.4e-176 622.1 465 60.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.4e-174 616.7 323 89.5
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.8e-170 602.4 337 83.1
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 4.1e-169 598.6 338 83.4
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-169 597.8 300 92.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.6e-165 585.5 450 57.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.6e-165 585.5 337 81.3
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.4e-153 545.0 290 87.9
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 9.5e-150 534.3 297 83.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.7e-146 522.3 291 83.2
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 6.3e-146 521.5 337 74.5
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.1e-145 520.8 297 82.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.8e-140 503.4 277 82.3
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 6.6e-135 485.0 338 64.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 8.9e-132 474.6 280 78.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.0e-111 406.4 449 42.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 9.9e-99 364.8 484 38.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.9e-74 283.5 168 75.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-58 229.2 110 94.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-58 229.2 110 94.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-57 228.0 110 93.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 6.3e-53 212.6 163 62.6
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.2e-42 177.6 106 80.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 9.2e-12 75.9 40 80.0


User provided reference genes

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