Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.7e-42 175.6 90 100.0
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 5.0e-39 164.1 88 92.0
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 8.6e-39 163.3 88 93.2
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.5e-38 162.5 88 92.0
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.5e-38 162.5 88 93.2
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 5.6e-38 160.6 88 89.8
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 5.6e-38 160.6 90 91.1
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.8e-37 158.3 88 88.6
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 5.8e-35 150.6 86 83.7
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 5.8e-35 150.6 86 83.7
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 5.8e-35 150.6 88 79.5
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 9.8e-35 149.8 86 86.0
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 2.2e-34 148.7 86 80.2
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 3.7e-34 147.9 87 81.6
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 3.7e-34 147.9 86 81.4
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 4.9e-34 147.5 86 82.6
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 8.3e-34 146.7 88 78.4
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 88 77.3
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 2.4e-33 145.2 88 77.3
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 2.4e-33 145.2 86 81.4
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.2e-33 144.8 88 77.3
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 7.0e-33 143.7 88 76.1
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 9.2e-33 143.3 88 77.3
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 9.2e-33 143.3 86 80.2
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 1.2e-32 142.9 88 78.4
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.2e-32 142.9 84 85.7
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 1.2e-32 142.9 88 76.1
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 1.2e-32 142.9 88 76.1
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.6e-32 142.5 86 80.2
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 75.0
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 75.0
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 2.7e-32 141.7 88 75.0
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.7e-32 141.7 88 76.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 2.7e-32 141.7 88 76.1
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 73.9
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 76.1
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 6.0e-32 140.6 88 76.1
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 6.0e-32 140.6 86 77.9
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 6.0e-32 140.6 99 71.7
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 7.8e-32 140.2 88 75.0
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 7.8e-32 140.2 88 75.0
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 7.8e-32 140.2 86 79.1
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 7.8e-32 140.2 86 77.9
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.3e-31 139.4 88 73.9
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 88 72.7
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.3e-31 139.4 88 76.1
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.7e-31 139.0 86 77.9
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 72.7
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 88 75.0
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-31 138.3 88 72.7
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.9e-31 137.9 88 72.7
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 5.1e-31 137.5 84 76.2
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.1e-31 137.5 88 72.7
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 71.6
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 71.6
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 71.6
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 72.7
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 69.3
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 71.6
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 71.6
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.1e-30 136.3 88 72.7
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 71.6
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 70.5
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.5e-30 136.0 86 73.3
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.5e-30 135.2 88 71.6
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 75.6
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 3.3e-30 134.8 87 72.4
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 70.5
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 70.5
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 70.5
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 72.7
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 75.0
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 9.5e-30 133.3 88 70.5
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 88 75.0
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.2e-29 132.9 88 69.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.1e-29 132.1 88 69.3
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 2.8e-29 131.7 86 74.4
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.7e-29 131.0 88 71.6
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 8.1e-29 130.2 86 74.4
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 8.1e-29 130.2 88 68.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 88 68.2
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.4e-28 129.4 88 65.9
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-28 129.0 89 70.8
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.8e-28 129.0 89 70.8
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 2.3e-28 128.6 70 90.0
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 2.3e-28 128.6 88 64.8
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 3.1e-28 128.3 95 66.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.0e-28 127.9 86 67.4
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 4.0e-28 127.9 88 65.9
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 5.2e-28 127.5 89 70.8
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 4.4e-27 124.4 88 65.9
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 4.4e-27 124.4 72 81.9
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.4e-27 124.4 120 55.0
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 4.4e-27 124.4 88 67.0
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 5.8e-27 124.0 88 61.4
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 5.8e-27 124.0 88 63.6
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 7.5e-27 123.6 95 66.3
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.3e-26 122.9 70 85.7
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 1.7e-26 122.5 70 84.3
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.7e-26 122.5 92 66.3
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 2.2e-26 122.1 84 70.2
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 3.7e-26 121.3 88 65.9
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 6.4e-26 120.6 88 68.2
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.4e-25 118.6 86 66.3
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 1.2e-24 116.3 69 79.7
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 4.6e-24 114.4 70 75.7
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.0e-23 113.2 66 84.8
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 2.5e-22 108.6 71 73.2
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 5.6e-22 107.5 70 74.3
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.6e-21 105.9 63 77.8
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.8e-20 102.4 68 72.1
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 5.2e-20 100.9 66 68.2
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.2e-19 99.8 55 83.6
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 3.4e-19 98.2 69 65.2
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.3e-18 96.3 77 63.6
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 2.9e-18 95.1 90 55.6
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 4.9e-18 94.4 77 64.9
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.4e-17 92.8 71 67.6
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.9e-14 82.4 62 71.0
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 9.6e-14 80.1 90 45.6
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 3.6e-13 78.2 53 77.4
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 4.0e-12 74.7 90 47.8
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.5e-06 56.2 45 57.8
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 3.3e-06 55.1 41 68.3


User provided reference genes

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