Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.7e-200 700.7 346 100.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.0e-164 582.0 345 83.8
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.4e-161 573.2 346 83.5
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.8e-161 572.8 347 83.0
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 3.1e-161 572.0 346 83.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.6e-157 559.7 350 81.1
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.6e-157 559.7 352 81.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 5.5e-150 534.6 302 88.1
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.6e-149 533.1 341 79.5
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.5e-147 526.6 322 81.4
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 6.9e-145 517.7 342 77.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 7.4e-139 497.7 343 73.8
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.8e-138 495.7 343 72.9
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.1e-137 492.3 297 79.5
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 7.6e-136 487.6 351 70.7
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.2e-135 486.1 325 75.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.9e-135 485.7 300 78.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 3.8e-135 485.3 298 78.9
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.5e-134 481.5 351 69.5
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 7.2e-134 481.1 351 69.2
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 9.3e-134 480.7 330 72.1
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 9.3e-134 480.7 350 70.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.2e-133 480.3 351 69.5
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 2.7e-133 479.2 345 71.0
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.4e-132 476.9 319 73.4
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 5.1e-132 474.9 307 75.6
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.9e-131 473.0 301 74.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.3e-131 471.9 300 76.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 4.3e-131 471.9 343 69.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 6.3e-130 468.0 337 70.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 8.2e-130 467.6 319 73.4
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 4.1e-129 465.3 387 62.5
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.3e-129 464.9 299 76.6
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.2e-128 463.8 318 71.7
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 4.5e-128 461.8 344 68.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.2e-127 459.5 291 77.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 2.9e-127 459.1 315 73.3
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 5.0e-127 458.4 292 74.0
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 5.0e-127 458.4 301 76.1
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.5e-126 456.1 328 69.2
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.7e-125 452.6 289 75.1
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 7.9e-125 451.1 298 74.8
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.0e-124 450.7 310 71.9
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.8e-124 449.9 334 68.9
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.3e-124 449.5 289 74.4
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 5.1e-124 448.4 285 76.8
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 5.1e-124 448.4 274 78.8
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 5.1e-124 448.4 331 67.4
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.0e-123 446.4 320 70.9
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 3.3e-123 445.7 318 70.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 3.3e-123 445.7 321 67.9
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 5.7e-123 444.9 298 72.1
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.7e-123 444.9 324 68.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 5.7e-123 444.9 333 67.9
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 5.7e-123 444.9 286 75.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 8.2e-122 441.0 332 68.1
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 3.1e-121 439.1 292 71.9
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 6.9e-121 438.0 334 65.9
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.2e-120 437.2 301 71.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 5.9e-120 434.9 306 70.3
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.3e-119 433.7 302 70.5
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.7e-119 433.3 286 72.7
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.8e-119 432.2 300 71.3
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 6.5e-119 431.4 276 76.4
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.1e-118 430.6 293 73.0
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.1e-118 430.6 350 64.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.1e-118 430.6 292 71.6
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.4e-118 430.3 307 67.8
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 4.2e-118 428.7 292 69.9
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.2e-117 427.2 315 67.6
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.2e-117 427.2 292 70.5
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.1e-117 426.4 307 67.8
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.3e-116 422.9 298 69.1
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.9e-116 422.2 327 63.9
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 8.8e-116 421.0 283 72.4
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.1e-115 420.6 270 74.1
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.1e-115 420.6 313 66.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.8e-114 416.0 336 62.8
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 2.6e-107 392.9 275 70.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.6e-107 392.9 314 66.6
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 2.6e-107 392.9 288 68.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.7e-106 389.0 332 63.0
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-105 386.3 322 63.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.1e-105 385.6 294 66.0
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 4.1e-105 385.6 271 67.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 8.5e-103 377.9 286 63.3
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-101 374.0 339 61.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.2e-99 367.5 292 62.0
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.3e-98 361.3 272 68.4
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.1e-97 360.9 288 60.8
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 5.4e-97 358.6 217 80.6
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 6.8e-92 341.7 266 60.9
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.3e-90 337.4 296 60.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.9e-86 323.6 292 62.0
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 8.3e-82 308.1 204 71.6
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 3.9e-79 299.3 386 43.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.2e-75 287.7 229 64.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.0e-71 274.6 309 53.1
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.4e-65 253.4 159 77.4
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.6e-61 239.6 166 69.9
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.5e-59 234.2 142 82.4
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 7.6e-59 231.9 149 75.2
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-53 214.2 292 46.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 9.0e-52 208.4 107 89.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.9e-50 202.6 162 61.7
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.1e-45 185.3 227 49.8
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.1e-45 185.3 227 50.2
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 9.9e-43 178.3 108 76.9
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 7.6e-35 152.1 89 79.8
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.3e-34 151.4 99 70.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 7.9e-32 142.1 82 79.3
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 8.4e-26 122.1 73 75.3
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.3e-21 105.9 144 43.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 5.9e-19 99.4 60 78.3
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.2e-18 97.4 79 63.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-17 94.7 98 52.0
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 6.1e-16 89.4 60 70.0
Glyma.10G195100 Glycine max HOM05D006565 ORTHO05D025622 5.3e-12 76.3 79 58.2
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 9.1e-12 75.5 81 51.9
TPR.G13189 Trifolium pratense HOM05D006565 ORTHO05D025622 9.1e-12 75.5 87 58.6
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.9e-10 70.5 41 75.6
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 8.5e-10 68.9 44 75.0
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.5e-09 67.4 45 71.1
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.6e-06 57.4 42 64.3
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 5.7e-06 56.2 34 73.5


User provided reference genes

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