Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 1.3e-137 493.0 242 100.0
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 3.6e-76 288.9 246 65.0
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 4.0e-75 285.4 242 63.6
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 2.2e-73 279.6 245 64.1
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 4.8e-68 261.9 241 64.3
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 2.9e-65 252.7 238 59.2
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 8.4e-65 251.1 253 60.9
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 8.4e-65 251.1 257 58.0
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 1.9e-64 250.0 254 60.6
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 9.3e-64 247.7 272 55.9
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 2.5e-48 196.4 239 51.0
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 7.2e-48 194.9 176 63.6
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 2.3e-46 189.9 265 46.4
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.5e-45 187.2 251 48.2
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.1e-43 181.0 235 47.7
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 5.5e-40 168.7 241 44.4
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 6.1e-39 165.2 240 45.0
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 1.0e-38 164.5 241 45.6
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.0e-38 164.5 244 46.3
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 3.0e-38 162.9 237 46.0
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 8.8e-38 161.4 175 53.7
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 8.8e-38 161.4 247 44.5
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 2.0e-37 160.2 235 43.8
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 3.3e-37 159.5 241 45.2
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 3.3e-37 159.5 239 42.7
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 3.3e-37 159.5 239 42.7
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 2.8e-36 156.4 257 43.2
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 1.1e-35 154.5 235 43.0
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.4e-35 154.1 256 42.6
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 2.4e-35 153.3 239 41.4
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.2e-34 151.0 250 42.4
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 2.6e-34 149.8 240 45.0
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 6.5e-33 145.2 239 41.8
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 8.5e-33 144.8 246 40.7
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.5e-32 144.1 265 40.8
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 2.5e-32 143.3 284 39.8
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 3.2e-32 142.9 238 41.6
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 5.5e-32 142.1 241 41.1
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 1.2e-31 141.0 247 40.1
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.6e-31 140.6 239 40.6
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 1.6e-31 140.6 275 38.2
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 3.6e-31 139.4 253 39.9
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 3.0e-30 136.3 262 40.5
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 6.7e-30 135.2 254 40.9
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 1.1e-29 134.4 88 75.0
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 2.6e-29 133.3 232 40.1
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 2.6e-29 133.3 262 39.7
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 5.7e-29 132.1 273 37.4
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 5.7e-29 132.1 263 36.9
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 7.5e-29 131.7 242 41.3
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 1.7e-28 130.6 237 38.4
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 2.2e-28 130.2 255 38.4
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 8.2e-28 128.3 260 36.2
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.1e-27 127.9 253 38.3
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.1e-27 127.9 250 38.4
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.1e-27 127.9 240 39.6
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 2.4e-27 126.7 254 35.8
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.4e-27 126.7 239 38.5
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 3.1e-27 126.3 150 55.3
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 4.1e-27 125.9 246 39.8
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 5.3e-27 125.6 259 38.6
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 5.3e-27 125.6 241 39.4
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 9.1e-27 124.8 264 35.2
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 9.1e-27 124.8 265 36.2
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 3.5e-26 122.9 284 35.6
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 3.5e-26 122.9 240 37.5
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 4.5e-26 122.5 265 36.6
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 1.3e-25 120.9 239 39.7
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 2.2e-25 120.2 266 37.2
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 6.5e-25 118.6 260 35.8
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 6.5e-25 118.6 236 39.4
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 3.2e-24 116.3 259 35.1
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 8.0e-23 111.7 261 35.2
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 2.3e-22 110.2 288 33.7
Medtr6g023085 Medicago truncatula HOM05D007349 ORTHO05D009317 5.7e-21 105.5 102 57.8
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 7.5e-21 105.1 234 33.8
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 9.8e-21 104.8 247 34.4
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 2.2e-20 103.6 229 35.4
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 8.3e-20 101.7 220 36.4
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 1.4e-19 100.9 254 31.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 9.1e-19 98.2 246 32.5
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 2.0e-18 97.1 86 55.8
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 5.9e-18 95.5 87 52.9
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 5.9e-18 95.5 79 57.0
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.3e-17 94.4 246 34.6
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 2.2e-17 93.6 88 54.5
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 1.1e-16 91.3 106 47.2
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 8.0e-15 85.1 106 42.5
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 6.8e-14 82.0 75 50.7
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 2.6e-13 80.1 191 35.1
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 2.6e-13 80.1 186 33.9
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 1.3e-12 77.8 163 35.0
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 8.3e-12 75.1 256 30.9
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 1.5e-08 64.3 170 37.6
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 4.3e-08 62.8 42 64.3
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 5.6e-08 62.4 81 42.0
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 9.5e-08 61.6 213 32.9
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 2.3e-06 57.0 128 36.7
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 6.8e-06 55.5 118 34.7


User provided reference genes

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