Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 3.2e-165 585.1 310 100.0
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 7.0e-72 275.0 318 58.2
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 5.0e-70 268.9 318 59.4
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 1.2e-63 247.7 314 56.1
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 3.5e-63 246.1 317 50.5
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 7.8e-55 218.4 277 53.8
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 3.8e-54 216.1 312 51.3
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 2.5e-53 213.4 312 51.6
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 3.2e-48 196.4 323 48.3
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 4.1e-48 196.1 316 47.8
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 1.3e-46 191.0 315 47.9
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.3e-46 191.0 315 47.9
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.3e-46 191.0 315 47.9
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 3.0e-46 189.9 312 48.7
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.5e-45 187.6 315 47.3
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 4.3e-45 186.0 314 47.1
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 7.3e-45 185.3 314 46.2
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 2.8e-44 183.3 326 45.7
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.1e-43 181.4 315 46.0
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.8e-43 180.6 263 50.6
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 8.9e-43 178.3 279 48.7
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 2.2e-41 173.7 322 46.3
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 3.7e-41 172.9 275 49.8
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.9e-41 172.6 283 48.8
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.7e-39 166.8 319 44.2
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 2.7e-39 166.8 310 42.9
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 6.0e-39 165.6 314 44.6
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 1.0e-38 164.9 314 44.3
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 1.9e-37 160.6 309 44.7
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 9.5e-37 158.3 273 48.4
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 8.1e-36 155.2 309 41.4
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.2e-34 151.4 306 42.8
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.5e-34 151.0 319 42.3
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 4.9e-33 146.0 291 43.6
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 8.3e-33 145.2 305 42.0
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 1.9e-32 144.1 213 51.6
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 5.4e-32 142.5 287 43.6
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 7.1e-32 142.1 314 40.8
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 7.8e-31 138.7 295 42.4
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 3.0e-30 136.7 272 41.5
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 5.1e-30 136.0 318 41.2
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 1.5e-29 134.4 313 39.9
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 1.9e-29 134.0 325 39.1
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 9.5e-29 131.7 291 41.9
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 8.1e-28 128.6 289 41.2
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 3.1e-27 126.7 302 36.4
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 4.0e-27 126.3 329 38.9
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.4e-26 122.9 307 38.8
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 8.4e-25 118.6 315 38.7
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 1.4e-24 117.9 300 40.0
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.6e-23 112.8 307 36.8
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 4.6e-23 112.8 364 35.2
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.3e-22 111.3 325 37.2
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 3.9e-22 109.8 281 38.8
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 6.6e-22 109.0 327 35.8
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 8.7e-22 108.6 350 34.6
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 1.1e-21 108.2 270 40.4
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 1.9e-21 107.5 324 38.0
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 9.6e-21 105.1 318 34.9
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 2.8e-20 103.6 270 39.6
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 3.6e-20 103.2 219 39.3
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 8.1e-20 102.1 321 35.5
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 3.1e-19 100.1 345 33.9
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 5.2e-19 99.4 347 35.2
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 9.0e-19 98.6 273 35.9
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 2.6e-18 97.1 311 35.4
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 4.4e-18 96.3 318 35.5
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 4.4e-18 96.3 322 35.1
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.9e-17 93.6 349 33.0
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 3.8e-17 93.2 352 33.8
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 6.4e-17 92.4 280 36.8
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 8.4e-17 92.0 287 36.6
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.4e-16 90.5 198 40.4
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 4.2e-16 89.7 253 38.7
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 5.4e-16 89.4 271 37.3
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 5.1e-14 82.8 309 34.3
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 8.7e-14 82.0 312 34.0
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 8.7e-14 82.0 216 37.5
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 2.1e-12 77.4 175 38.9
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 3.6e-12 76.6 174 39.1
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 1.2e-10 71.6 287 32.8
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 2.6e-10 70.5 272 34.2
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 5.8e-10 69.3 329 28.0
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 9.9e-10 68.6 342 30.1
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 1.7e-09 67.8 306 32.7
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 8.4e-09 65.5 285 31.9
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 4.2e-08 63.2 333 28.8
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 9.3e-08 62.0 296 28.7
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 9.3e-08 62.0 333 29.4
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 9.3e-08 62.0 333 29.4
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 9.3e-08 62.0 333 29.4
arahy.Tifrunner.gnm1.ann1.VN71XR Arachis hypogaea HOM05D000324 ORTHO05D010724 1.2e-07 61.6 258 28.7
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 6.0e-07 59.3 269 32.0
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 8.7e-06 55.5 290 27.9


User provided reference genes

Program Settings