Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 9.6e-71 270.0 133 100.0
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 1.7e-51 206.1 133 75.9
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 2.2e-51 205.7 133 75.9
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 3.8e-51 204.9 131 77.1
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 1.2e-49 199.9 133 71.4
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.2e-49 199.9 132 72.7
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.6e-49 199.5 133 72.2
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 4.7e-49 198.0 131 74.8
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 7.9e-49 197.2 131 73.3
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 3.0e-48 195.3 133 71.4
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 2.0e-47 192.6 133 68.4
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 2.0e-47 192.6 131 71.0
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 3.3e-47 191.8 133 68.4
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 1.3e-46 189.9 131 66.4
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 1.7e-46 189.5 131 66.4
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 2.8e-46 188.7 133 67.7
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 3.7e-46 188.3 131 71.8
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 6.3e-46 187.6 131 73.3
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 3.1e-45 185.3 131 68.7
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 9.1e-45 183.7 133 67.7
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 9.1e-45 183.7 133 67.7
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 1.5e-44 183.0 133 65.4
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 2.0e-44 182.6 131 67.9
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 1.1e-42 176.8 128 68.0
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 6.1e-41 171.0 138 61.6
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 1.0e-40 170.2 127 63.0
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 2.3e-40 169.1 129 62.0
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 3.9e-40 168.3 129 62.0
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 8.8e-40 167.2 133 60.2
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 1.5e-39 166.4 131 58.8
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 5.7e-39 164.5 131 57.3
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 5.7e-39 164.5 133 60.9
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 5.7e-39 164.5 111 69.4
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 7.4e-39 164.1 117 66.7
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 3.7e-38 161.8 133 60.2
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 3.7e-38 161.8 132 54.5
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 6.3e-38 161.0 131 55.7
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 1.8e-37 159.5 130 59.2
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.4e-37 159.1 131 55.7
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.2e-36 156.8 133 58.6
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 1.6e-36 156.4 131 53.4
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 2.6e-36 155.6 128 60.9
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 2.6e-36 155.6 128 60.9
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 4.5e-36 154.8 128 56.2
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.9e-35 152.1 130 58.5
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 5.0e-35 151.4 132 53.8
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 6.5e-35 151.0 130 56.2
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 8.5e-35 150.6 130 57.7
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 8.5e-35 150.6 130 56.2
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 1.1e-34 150.2 130 56.2
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 1.9e-34 149.4 134 56.7
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 5.5e-34 147.9 133 52.6
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 3.6e-33 145.2 131 51.9
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 6.1e-33 144.4 131 55.0
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 6.1e-33 144.4 131 49.6
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 2.3e-32 142.5 127 52.0
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 3.0e-32 142.1 130 54.6
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 4.0e-32 141.7 130 53.1
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 4.0e-32 141.7 129 53.5
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 5.2e-32 141.4 132 50.0
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 1.2e-31 140.2 127 55.1
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 2.6e-31 139.0 131 51.9
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 5.7e-31 137.9 131 50.4
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 5.7e-31 137.9 131 50.4
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 9.7e-31 137.1 97 59.8
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 2.2e-30 136.0 135 52.6
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 2.2e-30 136.0 90 66.7
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 3.7e-30 135.2 128 50.8
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 1.0e-27 127.1 129 49.6
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.7e-27 126.3 78 69.2
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.7e-27 126.3 103 57.3
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 6.5e-27 124.4 131 54.2
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 8.5e-27 124.0 86 59.3
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 2.5e-26 122.5 119 46.2
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 6.1e-25 117.9 107 48.6
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.0e-24 117.1 110 50.9
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.4e-24 116.7 149 44.3
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 8.8e-24 114.0 101 53.5
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 1.4e-21 106.7 74 63.5
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.0e-20 102.8 87 55.2
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 4.5e-20 101.7 153 40.5
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 7.7e-20 100.9 121 40.5
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 1.0e-16 90.5 133 48.1
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.8e-16 89.7 55 70.9
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 2.0e-15 86.3 91 40.7
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 4.9e-14 81.6 79 48.1
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 4.9e-14 81.6 63 55.6
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 1.4e-13 80.1 67 58.2
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 1.8e-13 79.7 72 52.8
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 2.4e-13 79.3 128 43.0
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.1e-13 78.6 79 49.4
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 4.1e-13 78.6 121 33.9
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 1.6e-12 76.6 63 54.0
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 5.0e-11 71.6 70 51.4
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 1.0e-08 63.9 97 34.0
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.2e-07 60.5 66 45.5
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 1.2e-07 60.5 42 64.3
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 2.6e-07 59.3 131 31.3
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 5.8e-07 58.2 49 51.0
Thhalv10017379m.g Eutrema salsugineum HOM05D002174 ORTHO05D005941 9.8e-07 57.4 104 31.7
Glyma.02G017851 Glycine max HOM05D007613 ORTHO05D009344 1.7e-06 56.6 53 60.4
SEGI_00670 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 2.2e-06 56.2 121 28.1
Dinv33054 Davidia involucrata HOM05D000286 ORTHO05D000170 4.9e-06 55.1 46 69.6


User provided reference genes

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