Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 6.0e-292 1006.9 551 100.0
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 7.6e-154 548.1 479 68.1
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 8.7e-142 508.1 426 67.4
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 8.4e-137 491.5 480 64.0
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 4.1e-131 472.6 481 60.9
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 2.2e-129 466.8 427 63.7
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.2e-129 466.8 483 60.7
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 7.4e-125 451.8 440 64.1
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 6.3e-124 448.7 475 59.2
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.5e-122 444.1 484 57.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 4.8e-116 422.5 491 57.0
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.0e-102 376.3 517 50.1
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 4.4e-101 372.9 500 51.2
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 9.1e-99 365.2 504 51.2
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 6.5e-97 359.0 527 49.1
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.5e-93 347.8 499 48.9
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 8.3e-92 342.0 509 49.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 3.5e-90 336.7 483 49.9
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 4.2e-88 329.7 501 50.1
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.3e-86 323.9 493 46.2
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 3.0e-86 323.6 506 47.4
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 3.4e-85 320.1 529 45.7
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.8e-82 308.9 493 44.8
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.5e-80 304.7 462 48.5
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.6e-79 301.2 502 45.4
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.1e-79 299.3 476 44.7
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 8.0e-79 298.9 526 46.8
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.4e-77 293.5 512 45.9
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 3.4e-77 293.5 489 46.2
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.9e-76 290.4 500 45.6
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.1e-75 288.5 493 43.2
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 7.8e-74 282.3 501 44.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.0e-73 282.0 486 45.3
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.7e-73 281.2 443 45.1
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 2.3e-70 270.8 492 41.5
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.2e-67 260.4 450 43.8
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 6.6e-65 252.7 515 42.3
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.1e-63 247.7 489 42.7
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.8e-63 247.3 448 43.8
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 2.8e-63 247.3 486 42.6
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.6e-61 240.7 491 41.3
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 7.5e-61 239.2 492 40.9
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.7e-60 238.0 433 43.0
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 3.7e-60 236.9 529 41.0
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.7e-60 236.9 508 42.1
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 6.4e-60 236.1 483 41.4
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 6.4e-60 236.1 483 41.4
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 8.3e-60 235.7 492 40.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.9e-59 234.6 431 45.7
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.2e-59 233.8 524 40.1
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 9.2e-59 232.3 490 42.4
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.1e-58 231.1 451 43.5
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 5.1e-57 226.5 549 38.8
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.6e-57 225.7 286 51.7
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.5e-56 224.9 505 40.6
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 2.5e-56 224.2 543 38.7
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.6e-55 221.5 442 38.9
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.1e-54 218.8 493 40.8
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.4e-54 217.6 446 42.2
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 8.4e-52 209.1 452 38.1
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 5.4e-51 206.5 497 39.0
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.2e-50 205.3 449 38.8
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 1.2e-50 205.3 386 42.5
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 3.5e-50 203.8 502 38.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.0e-49 202.2 486 39.9
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 3.9e-49 200.3 511 37.8
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 5.1e-49 199.9 341 45.2
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 9.6e-48 195.7 229 56.8
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.1e-47 194.5 453 38.2
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 3.6e-47 193.7 505 37.6
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.2e-47 193.0 492 37.6
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 2.4e-46 191.0 489 39.5
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 4.0e-46 190.3 518 38.8
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 6.9e-46 189.5 501 36.7
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.0e-45 188.0 492 37.4
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 5.4e-43 179.9 482 39.0
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 7.1e-43 179.5 488 36.7
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 2.1e-42 177.9 404 41.1
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 6.0e-42 176.4 491 36.9
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 3.0e-41 174.1 437 37.8
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 4.3e-40 170.2 642 30.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 7.3e-40 169.5 492 33.7
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.6e-39 168.3 317 42.9
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.8e-39 167.5 437 36.2
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 8.1e-39 166.0 484 37.8
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 9.0e-38 162.5 486 36.0
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.2e-37 162.2 488 36.1
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 3.4e-37 160.6 434 36.6
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 4.5e-37 160.2 222 52.3
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.8e-36 157.1 196 52.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 4.9e-36 156.8 443 36.8
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.2e-35 154.1 198 50.5
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 5.4e-35 153.3 291 39.9
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 9.3e-35 152.5 122 66.4
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.2e-34 152.1 338 39.9
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.2e-34 152.1 455 37.1
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 4.6e-34 150.2 455 37.8
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 7.9e-34 149.4 445 35.7
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 8.7e-33 146.0 157 54.8
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 8.7e-33 146.0 484 33.5
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.9e-32 144.8 346 38.4
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.0e-30 137.1 205 45.9
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 3.4e-29 134.0 580 31.0
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 5.8e-29 133.3 449 32.7
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 9.9e-29 132.5 441 36.1
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 2.9e-28 131.0 77 90.9
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.4e-27 127.9 210 42.4
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.6e-26 123.6 359 37.9
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 4.5e-21 107.1 433 31.9
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 4.5e-21 107.1 433 31.9
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.7e-20 105.1 113 51.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 8.4e-20 102.8 166 42.8
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.1e-19 99.8 74 74.3
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.1e-18 98.2 331 34.1
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.0e-17 95.9 330 33.9
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 1.6e-15 88.6 431 29.5
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 6.9e-14 83.2 323 33.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.2e-13 82.4 334 31.7
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 3.8e-12 77.4 63 61.9
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 5.1e-09 67.0 105 41.0
VMungo0720G0679 Vigna mungo HOM05D006326 ORTHO05D007589 6.7e-09 66.6 46 69.6
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 2.4e-06 58.2 505 27.3


User provided reference genes

Program Settings