Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 9.7e-66 253.4 138 100.0
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 2.4e-32 142.5 139 62.6
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 5.0e-30 134.8 136 58.1
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 2.1e-28 129.4 152 53.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.4e-27 126.7 136 55.1
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 4.0e-27 125.2 138 55.8
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 6.8e-27 124.4 138 54.3
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 8.9e-27 124.0 137 51.1
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 1.5e-26 123.2 138 52.9
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 7.5e-26 120.9 137 51.1
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 9.8e-26 120.6 93 71.0
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 2.2e-25 119.4 133 57.9
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.9e-25 119.0 89 71.9
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.9e-25 119.0 89 71.9
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.7e-25 118.6 138 52.2
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.9e-25 118.2 127 54.3
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 6.3e-25 117.9 136 51.5
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.8e-24 116.3 130 53.1
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 5.4e-24 114.8 137 50.4
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.4e-24 114.8 140 53.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.0e-24 114.4 100 61.0
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 2.0e-23 112.8 129 52.7
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.0e-23 112.8 143 48.3
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.7e-23 112.5 100 60.0
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.7e-23 112.5 100 60.0
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.7e-23 112.5 129 46.5
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 3.5e-23 112.1 143 48.3
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 4.6e-23 111.7 137 50.4
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.0e-22 110.5 88 63.6
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.0e-22 110.5 88 73.9
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.3e-22 110.2 130 51.5
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.7e-22 109.8 130 51.5
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 3.9e-22 108.6 88 62.5
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 6.6e-22 107.8 140 46.4
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 8.6e-22 107.5 133 48.1
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-21 107.1 130 50.8
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 3.3e-21 105.5 87 64.4
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 4.3e-21 105.1 133 50.4
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.2e-20 103.6 99 65.7
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 2.1e-20 102.8 100 55.0
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 3.6e-20 102.1 112 49.1
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 6.1e-20 101.3 89 60.7
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 8.0e-20 100.9 136 47.1
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.8e-19 99.8 90 58.9
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 5.2e-19 98.2 97 55.7
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 8.9e-19 97.4 86 58.1
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 1.2e-18 97.1 99 64.6
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 2.0e-18 96.3 91 53.8
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.6e-18 95.9 125 48.0
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 4.4e-18 95.1 117 47.0
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 4.4e-18 95.1 77 63.6
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.8e-18 94.7 89 59.6
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 7.5e-18 94.4 111 47.7
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 7.5e-18 94.4 111 47.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 7.5e-18 94.4 111 47.7
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.5e-18 94.4 88 60.2
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.2e-17 92.8 116 47.4
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.2e-17 92.8 116 47.4
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.2e-17 92.8 137 46.0
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.9e-17 92.4 124 44.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 4.9e-17 91.7 135 43.0
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.9e-17 91.7 89 58.4
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 8.3e-17 90.9 140 42.9
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.4e-16 90.1 133 42.1
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.9e-16 89.7 112 47.3
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 3.2e-16 89.0 88 58.0
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 4.1e-16 88.6 89 53.9
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 7.0e-16 87.8 117 46.2
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 9.2e-16 87.4 79 63.3
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 9.2e-16 87.4 79 63.3
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.2e-16 87.4 133 41.4
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.2e-15 87.0 77 59.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.2e-15 87.0 131 45.0
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.2e-15 87.0 143 46.9
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.7e-15 85.9 136 44.9
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 3.5e-15 85.5 134 37.3
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 6.0e-15 84.7 85 55.3
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.0e-14 84.0 113 46.0
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.3e-14 83.6 76 60.5
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.3e-14 83.6 89 49.4
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 3.0e-14 82.4 133 40.6
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 3.0e-14 82.4 73 60.3
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.0e-14 81.6 84 56.0
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 8.6e-14 80.9 111 54.1
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 8.6e-14 80.9 76 59.2
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 8.6e-14 80.9 76 59.2
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 8.6e-14 80.9 76 60.5
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 3.3e-13 79.0 99 46.5
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 3.3e-13 79.0 54 68.5
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 9.5e-13 77.4 76 57.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 9.5e-13 77.4 77 61.0
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.2e-12 77.0 77 53.2
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.6e-12 76.6 76 56.6
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 8.1e-12 74.3 77 53.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.1e-11 73.9 79 53.2
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.8e-11 73.2 79 55.7
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.8e-11 73.2 74 55.4
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 8.9e-11 70.9 79 53.2
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.0e-10 69.7 79 53.2
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.0e-10 69.7 79 53.2
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.2e-09 66.2 90 42.2
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 2.9e-09 65.9 74 45.9
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 4.9e-09 65.1 102 45.1
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 8.6e-06 54.3 121 36.4


User provided reference genes

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