Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-247 859.0 428 100.0
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-55 221.5 296 41.9
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 4.1e-54 216.5 296 41.2
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 6.3e-47 192.6 353 34.0
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 4.8e-39 166.4 396 31.3
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-34 150.2 378 28.3
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-32 144.8 316 29.7
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 4.4e-32 143.3 356 28.9
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-31 141.7 200 35.5
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-30 137.1 301 28.6
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 5.4e-30 136.3 240 32.9
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-29 134.8 337 27.3
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 7.7e-29 132.5 378 27.5
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-28 132.1 268 31.3
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-28 130.6 378 27.5
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 3.8e-28 130.2 322 27.0
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-28 129.4 256 31.6
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-26 124.4 329 26.4
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-26 124.0 339 26.5
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 6.1e-26 122.9 296 27.4
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-25 122.1 205 33.7
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-25 121.3 331 27.5
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 6.8e-25 119.4 366 25.7
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 8.8e-25 119.0 287 27.9
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-24 117.5 300 27.0
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 3.4e-24 117.1 234 30.3
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 3.4e-24 117.1 275 29.8
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-23 113.6 352 26.1
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-22 110.5 407 23.6
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-21 108.6 284 26.1
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-21 107.8 262 26.7
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-21 107.8 373 24.9
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-20 105.5 257 27.6
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-20 104.0 162 32.7
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-20 103.2 282 25.9
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-20 102.4 161 32.9
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 1.9e-19 101.3 289 26.3
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 5.5e-19 99.8 153 32.7
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 9.5e-19 99.0 261 25.7
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-18 97.8 202 27.2
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-17 94.4 294 24.1
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.9e-17 92.4 245 26.5
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.5e-16 91.7 267 24.7
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 7.5e-16 89.4 188 26.6
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 9.8e-16 89.0 222 28.4
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 6.3e-15 86.3 226 26.5
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-14 85.5 129 37.2
Phvul.010G072600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-14 84.0 292 21.9
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.4e-14 83.2 410 22.4
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-14 82.4 194 24.7
Medtr0073s0040 Medicago truncatula HOM05D008558 ORTHO05D001516 9.2e-14 82.4 142 33.8
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.2e-14 82.4 310 21.3
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.2e-14 82.4 306 23.5
Phvul.009G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-13 81.6 332 22.9
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-13 80.5 145 32.4
Phvul.010G071200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.5e-13 80.5 318 23.9
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.5e-13 80.5 421 22.3
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.6e-13 80.1 279 22.6
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-13 79.7 234 27.4
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 5.9e-13 79.7 115 35.7
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-12 78.2 196 28.6
Glyma.13G027700 Glycine max HOM05D002777 ORTHO05D001516 8.6e-12 75.9 328 23.2
TPR.G14641 Trifolium pratense HOM05D002777 ORTHO05D001516 8.6e-12 75.9 219 27.9
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-11 75.5 236 25.8
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-11 75.5 301 22.9
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 1.1e-11 75.5 226 27.0
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 1.5e-11 75.1 391 22.3
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-11 73.6 158 32.3
Lj3g0009896 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-10 72.0 252 23.0
Lj6g0026012 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-10 71.6 356 24.2
Lj5g0007202 Lotus japonicus HOM05D002777 ORTHO05D001516 2.8e-10 70.9 335 26.0
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 2.8e-10 70.9 171 27.5
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.7e-10 70.1 135 24.4
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 4.7e-10 70.1 171 26.9
Lj5g0005649 Lotus japonicus HOM05D002777 ORTHO05D001516 6.2e-10 69.7 177 23.2
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 6.2e-10 69.7 88 39.8
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 6.2e-10 69.7 88 39.8
Thecc.05G216900 Theobroma cacao HOM05D009258 ORTHO05D009583 6.2e-10 69.7 277 22.4
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-09 68.9 173 24.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 1.0e-09 68.9 137 29.9
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-09 68.6 261 22.2
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 1.4e-09 68.6 81 39.5
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-09 68.6 311 22.8
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-09 68.2 182 28.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.3e-09 67.8 237 22.4
Lj5g0003527 Lotus japonicus HOM05D019244 ORTHO05D010358 2.3e-09 67.8 78 39.7
Lj5g0019505 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-09 67.8 152 26.3
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.1e-09 67.4 353 20.4
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 3.1e-09 67.4 97 34.0
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-09 67.0 135 27.4
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 1.2e-08 65.5 184 25.0
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.0e-08 64.7 368 22.6
COL.COLO4_04627 Corchorus olitorius HOM05D008263 ORTHO05D009583 2.0e-08 64.7 350 21.7
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-08 64.7 139 28.8
Psat7g119560 Pisum sativum HOM05D007807 ORTHO05D001516 2.0e-08 64.7 295 23.4
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-08 64.3 230 25.2
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 2.6e-08 64.3 416 22.8
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 4.4e-08 63.5 399 20.3
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.4e-08 63.5 114 29.8
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-08 63.2 139 27.3
Lj5g0009491 Lotus japonicus HOM05D002777 ORTHO05D001516 7.5e-08 62.8 282 24.5
Medtr3g048390 Medicago truncatula HOM05D008558 ORTHO05D011658 7.5e-08 62.8 164 28.0
Atru.chr1.2921 Acer truncatum HOM05D016018 ORTHO05D017146 1.3e-07 62.0 173 25.4
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 1.7e-07 61.6 364 21.4
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.7e-07 61.6 106 26.4
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-07 61.2 448 22.5
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.9e-07 60.8 235 22.6
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.7e-07 60.5 84 34.5
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 3.7e-07 60.5 295 22.7
Thecc.09G245100 Theobroma cacao HOM05D009258 ORTHO05D009583 3.7e-07 60.5 185 25.9
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.9e-07 60.1 138 29.7
Medtr1148s0010 Medicago truncatula HOM05D008558 ORTHO05D001516 4.9e-07 60.1 361 22.7
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 6.4e-07 59.7 179 27.4
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 6.4e-07 59.7 304 20.1
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.4e-07 59.7 368 22.6
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 8.3e-07 59.3 135 23.0
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.1e-06 58.9 116 32.8
COL.COLO4_15431 Corchorus olitorius HOM05D008263 ORTHO05D009583 1.1e-06 58.9 294 23.1
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.9 227 23.8
Lj4g0023448 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.9 135 25.2
MBI11_g44589_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 1.1e-06 58.9 295 21.7
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.1e-06 58.9 251 24.7
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 1.9e-06 58.2 103 28.2
Lj4g0021570 Lotus japonicus HOM05D002777 ORTHO05D001516 1.9e-06 58.2 356 20.2
Medtr4g061490 Medicago truncatula HOM05D008558 ORTHO05D001516 1.9e-06 58.2 233 24.9
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-06 57.8 381 20.2
Ah.12g060360 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-06 57.8 101 29.7
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.4e-06 57.8 410 19.8
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-06 57.4 186 24.2
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.2e-06 57.4 335 20.6
PSO455G0099 Papaver somniferum HOM05D000054 ORTHO05D000286 3.2e-06 57.4 111 28.8
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 4.1e-06 57.0 85 32.9
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.1e-06 57.0 95 31.6
COL.COLO4_23771 Corchorus olitorius HOM05D008263 ORTHO05D009583 4.1e-06 57.0 291 23.4
COL.COLO4_26538 Corchorus olitorius HOM05D008263 ORTHO05D009583 4.1e-06 57.0 111 33.3
Lj5g0022095 Lotus japonicus HOM05D002777 ORTHO05D001516 4.1e-06 57.0 242 22.7
Medtr5g053650 Medicago truncatula HOM05D008558 ORTHO05D001516 4.1e-06 57.0 140 27.9
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.4e-06 56.6 86 36.0
COL.COLO4_00259 Corchorus olitorius HOM05D008263 ORTHO05D009583 5.4e-06 56.6 400 21.8
Glyma.05G115300 Glycine max HOM05D002777 ORTHO05D001516 5.4e-06 56.6 375 21.3
COL.COLO4_38463 Corchorus olitorius HOM05D008263 ORTHO05D009583 7.0e-06 56.2 330 23.9
Lj3g0022675 Lotus japonicus HOM05D002777 ORTHO05D001516 7.0e-06 56.2 160 23.1
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.0e-06 56.2 104 26.0
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 7.0e-06 56.2 342 19.6
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 7.0e-06 56.2 223 23.8
Ah.05g174560 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.2e-06 55.8 86 31.4
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.2e-06 55.8 114 29.8
Aqoxy4G01937 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 9.2e-06 55.8 268 24.3
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 9.2e-06 55.8 90 34.4
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 9.2e-06 55.8 90 34.4
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.2e-06 55.8 117 29.1


User provided reference genes

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