Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 3.0e-128 461.8 232 100.0
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 3.2e-98 362.1 238 78.2
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 2.2e-94 349.4 239 75.3
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.6e-92 343.2 242 75.6
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 3.8e-91 338.6 238 73.5
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 6.6e-91 337.8 225 75.6
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.5e-90 336.7 230 75.2
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.5e-90 336.7 230 75.2
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 8.0e-89 330.9 229 75.5
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 2.2e-86 322.8 205 77.1
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 6.4e-86 321.2 226 73.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.8e-85 319.7 256 68.0
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.0e-85 317.8 205 78.5
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 9.2e-85 317.4 177 87.0
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 9.2e-85 317.4 217 74.7
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 9.2e-85 317.4 178 87.1
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 9.2e-85 317.4 242 69.4
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.2e-84 317.0 259 66.8
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.5e-84 315.5 178 87.1
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 3.5e-84 315.5 181 85.6
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 4.6e-84 315.1 205 77.6
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 5.9e-84 314.7 177 87.0
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 5.9e-84 314.7 184 83.7
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 5.9e-84 314.7 249 66.3
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 7.8e-84 314.3 178 86.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.7e-83 313.2 232 73.3
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.3e-83 312.8 177 86.4
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.3e-83 312.8 261 64.8
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 3.9e-83 312.0 188 81.9
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.0e-83 311.6 179 84.9
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 8.6e-83 310.8 178 84.8
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.5e-82 310.1 220 73.2
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.9e-82 309.7 225 72.0
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.9e-82 309.7 178 84.8
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 4.3e-82 308.5 177 84.2
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 4.3e-82 308.5 178 83.1
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 4.3e-82 308.5 178 83.1
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 4.3e-82 308.5 188 83.0
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 1.2e-81 307.0 230 70.9
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 1.6e-81 306.6 225 71.6
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.8e-81 305.8 188 79.8
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 4.7e-81 305.1 178 82.0
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.4e-80 303.5 194 79.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.8e-80 303.1 188 79.3
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.8e-80 303.1 226 69.5
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.8e-80 303.1 240 67.1
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 4.0e-80 302.0 177 83.6
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 4.0e-80 302.0 178 82.0
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.2e-80 301.6 179 82.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 6.8e-80 301.2 178 81.5
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.2e-79 300.4 190 80.5
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.2e-79 300.4 229 69.9
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.2e-79 300.4 229 68.1
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.2e-79 300.4 186 80.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 4.4e-79 298.5 215 71.2
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 5.8e-79 298.1 179 82.1
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 7.5e-79 297.7 177 81.9
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 7.5e-79 297.7 188 78.7
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 7.5e-79 297.7 177 80.8
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 9.8e-79 297.4 177 83.1
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 9.8e-79 297.4 188 77.7
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 9.8e-79 297.4 208 73.6
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 1.7e-78 296.6 184 77.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.2e-78 296.2 188 78.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 8.3e-78 294.3 192 76.6
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 4.1e-77 292.0 179 81.0
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 9.2e-77 290.8 230 65.7
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.8e-76 287.7 178 78.7
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.9e-75 285.4 235 65.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 7.3e-74 281.2 210 69.5
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.1e-72 277.3 173 79.2
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.1e-72 277.3 179 76.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.1e-72 277.3 179 77.1
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 5.2e-72 275.0 250 63.2
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.0e-71 273.1 154 84.4
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 3.4e-71 272.3 177 77.4
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 7.5e-71 271.2 203 68.0
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.1e-69 267.3 153 83.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 5.4e-69 265.0 189 71.4
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.4e-69 265.0 170 77.6
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.6e-65 252.3 186 68.3
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.4e-64 250.4 170 71.8
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 4.0e-64 248.8 186 67.2
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 9.9e-63 244.2 178 70.8
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 6.4e-62 241.5 177 69.5
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 6.4e-62 241.5 195 63.6
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.1e-61 240.7 178 68.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 3.5e-60 235.7 125 93.6
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 7.6e-55 218.0 121 86.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.3e-54 217.2 159 70.4
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.3e-54 217.2 125 84.0
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.6e-47 193.0 126 72.2
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.9e-45 186.8 191 52.4
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.3e-43 180.6 155 62.6
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.9e-42 176.8 94 89.4
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.6e-41 173.7 100 82.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 4.8e-33 145.6 127 62.2
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 6.5e-30 135.2 75 85.3
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.5e-26 124.0 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 6.5e-22 108.6 58 91.4
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 8.2e-09 65.1 60 51.7


User provided reference genes

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