Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 4.3e-81 304.7 161 100.0
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 4.2e-52 208.4 173 72.3
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.2e-51 206.8 161 72.7
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.6e-51 206.5 162 74.7
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.6e-51 206.5 161 72.7
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.0e-50 203.8 170 69.4
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 3.0e-50 202.2 162 73.5
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 1.2e-46 190.3 161 67.1
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 2.2e-45 186.0 167 65.9
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.9e-45 185.7 152 68.4
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 2.9e-45 185.7 151 67.5
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 6.4e-45 184.5 152 67.8
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.9e-44 183.0 161 66.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.9e-44 183.0 152 67.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 5.5e-44 181.4 154 64.9
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.2e-43 180.3 159 65.4
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.6e-43 179.9 161 64.6
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-43 179.5 164 63.4
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-43 179.5 164 63.4
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 2.7e-43 179.1 154 64.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 6.0e-43 177.9 159 67.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 7.9e-43 177.6 152 65.8
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.0e-42 177.2 158 63.9
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.0e-42 177.2 152 65.8
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.8e-42 176.4 157 64.3
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 3.9e-42 175.3 140 68.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 5.1e-42 174.9 152 64.5
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 5.1e-42 174.9 141 67.4
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 5.1e-42 174.9 145 68.3
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 6.7e-42 174.5 161 64.0
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 6.7e-42 174.5 161 66.5
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 8.7e-42 174.1 158 64.6
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.1e-41 173.7 152 65.8
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.9e-41 172.9 156 63.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.9e-41 172.9 148 64.9
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 2.5e-41 172.6 153 62.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 2.5e-41 172.6 157 63.1
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 5.6e-41 171.4 151 62.9
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 9.6e-41 170.6 146 65.1
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.8e-40 169.1 155 62.6
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 3.7e-40 168.7 150 64.0
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 6.2e-40 167.9 140 69.3
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 8.2e-40 167.5 162 60.5
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.8e-39 166.4 154 60.4
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 5.3e-39 164.9 152 59.9
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 6.9e-39 164.5 156 63.5
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 9.0e-39 164.1 154 60.4
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 9.0e-39 164.1 153 60.8
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-38 163.7 164 62.2
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.2e-38 163.7 150 62.0
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.2e-38 163.7 161 58.4
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 2.0e-38 162.9 165 60.6
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.0e-38 162.9 154 61.0
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 3.4e-38 162.2 157 59.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 4.5e-38 161.8 165 61.2
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.5e-38 161.8 165 59.4
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 4.5e-38 161.8 154 59.7
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 2.2e-37 159.5 154 58.4
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.8e-37 158.7 137 63.5
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 3.8e-37 158.7 153 58.2
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 6.5e-37 157.9 141 64.5
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 8.4e-37 157.5 163 56.4
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.9e-36 156.4 153 58.2
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.9e-36 156.4 154 58.4
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.9e-36 156.4 154 58.4
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.9e-36 156.4 159 58.5
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.9e-36 156.4 159 58.5
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.5e-36 156.0 156 59.6
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 3.2e-36 155.6 159 57.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 5.5e-36 154.8 161 59.0
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.6e-35 153.3 147 59.9
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 2.7e-35 152.5 154 58.4
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 2.7e-35 152.5 154 58.4
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 3.5e-35 152.1 157 58.6
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 1.0e-34 150.6 154 57.1
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 1.0e-34 150.6 154 57.1
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 3.0e-34 149.1 165 54.5
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 3.9e-34 148.7 153 57.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.1e-34 148.3 164 56.7
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 6.7e-34 147.9 96 76.0
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 8.7e-34 147.5 153 57.5
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.1e-33 147.1 153 56.9
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.5e-33 146.7 154 58.4
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.9e-33 146.4 153 57.5
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 3.3e-33 145.6 167 54.5
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 4.3e-33 145.2 158 55.7
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 5.7e-33 144.8 156 54.5
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 7.4e-33 144.4 157 56.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 3.7e-32 142.1 145 62.8
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 3.7e-32 142.1 159 56.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 3.7e-32 142.1 160 54.4
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 3.1e-31 139.0 96 69.8
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.5e-30 136.7 150 52.0
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 3.4e-30 135.6 84 79.8
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.3e-29 133.7 154 51.3
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 2.2e-29 132.9 179 46.9
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 6.5e-29 131.3 177 48.6
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 8.5e-29 131.0 139 56.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 9.3e-28 127.5 153 51.6
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 3.9e-26 122.1 157 47.8
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 3.9e-26 122.1 156 53.2
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 3.3e-25 119.0 144 50.0
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 9.7e-25 117.5 101 62.4
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.2e-24 116.3 84 70.2
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.2e-24 114.4 152 49.3
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 1.4e-23 113.6 109 61.5
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 6.9e-23 111.3 158 48.1
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-22 110.2 156 46.8
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.6e-22 109.4 151 49.7
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.4e-22 109.0 150 47.3
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.5e-22 108.6 152 47.4
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 2.9e-21 105.9 120 56.7
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 3.8e-21 105.5 142 51.4
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.4e-20 103.6 85 64.7
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.5e-20 102.8 60 90.0
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 5.5e-20 101.7 140 46.4
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 7.9e-19 97.8 90 60.0
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 4.4e-17 92.0 140 43.6
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.8e-16 89.4 105 56.2
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.7e-16 89.0 117 49.6
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 4.1e-15 85.5 96 51.0
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.5e-12 76.3 154 35.1
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.1e-09 67.4 145 34.5
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 2.8e-08 62.8 79 49.4
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 2.6e-06 56.2 117 40.2
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 2.6e-06 56.2 107 36.4


User provided reference genes

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