Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 2.0e-95 352.8 233 100.0
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 1.0e-46 191.0 234 56.4
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.2e-44 184.1 236 54.2
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.6e-44 183.7 234 58.1
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 6.3e-41 171.8 231 54.5
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.1e-40 171.0 238 52.5
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 7.6e-39 164.9 237 53.2
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 9.3e-37 157.9 240 54.2
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.4e-32 143.3 253 47.0
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.8e-27 127.1 297 40.4
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 1.0e-19 101.3 124 59.7
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 5.7e-18 95.5 240 39.2
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 2.2e-17 93.6 151 45.7
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.1e-16 91.3 140 44.3
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 1.1e-16 91.3 140 44.3
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.4e-16 90.1 237 40.5
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 4.1e-16 89.4 140 44.3
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 5.3e-16 89.0 232 36.6
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 5.3e-16 89.0 235 34.9
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.3e-16 89.0 232 35.8
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 9.1e-16 88.2 243 36.2
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 1.2e-15 87.8 186 39.8
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.7e-14 84.0 234 36.3
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 2.2e-14 83.6 240 37.9
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 1.5e-13 80.9 240 34.2
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 1.9e-13 80.5 244 34.8
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 2.5e-13 80.1 235 36.6
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 5.5e-13 79.0 233 35.6
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 9.4e-13 78.2 235 35.3
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.2e-12 77.8 233 33.5
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 2.7e-12 76.6 233 33.9
TPR.G36127 Trifolium pratense HOM05D007490 ORTHO05D008750 2.7e-12 76.6 101 60.4
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 3.6e-12 76.3 130 44.6
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.4e-11 74.3 139 43.2
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.0e-11 73.2 243 32.9
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 3.0e-11 73.2 142 43.0
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 3.0e-11 73.2 186 36.6
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 5.2e-11 72.4 244 34.4
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 6.7e-11 72.0 233 34.8
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.7e-11 72.0 196 38.8
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 6.7e-11 72.0 129 45.0
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 1.5e-10 70.9 140 42.9
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 2.0e-10 70.5 238 34.0
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 2.0e-10 70.5 150 34.7
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 4.4e-10 69.3 99 47.5
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 5.7e-10 68.9 192 31.2
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 9.7e-10 68.2 235 34.9
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 9.7e-10 68.2 194 33.5
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.2e-09 67.0 244 34.0
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 2.8e-09 66.6 232 32.8
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 2.8e-09 66.6 233 33.9
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 6.3e-09 65.5 100 53.0
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.1e-08 64.7 102 45.1
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.4e-08 64.3 197 35.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.4e-08 64.3 133 43.6
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 2.4e-08 63.5 133 43.6
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 3.1e-08 63.2 238 31.5
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 3.1e-08 63.2 132 40.9
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 5.3e-08 62.4 237 32.1
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 5.3e-08 62.4 237 32.1
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 5.3e-08 62.4 191 36.6
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 5.3e-08 62.4 158 42.4
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 7.0e-08 62.0 247 33.2
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 9.1e-08 61.6 156 37.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 9.1e-08 61.6 134 41.0
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.6e-07 60.8 238 33.6
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.0e-07 60.5 108 45.4
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 4.5e-07 59.3 155 36.1
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 7.7e-07 58.5 184 31.5
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 7.7e-07 58.5 237 33.8
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.3e-06 57.8 141 41.1
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.7e-06 57.4 233 30.5
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 1.7e-06 57.4 238 30.7
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 2.2e-06 57.0 232 30.6
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 2.9e-06 56.6 224 29.9
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 3.8e-06 56.2 40 75.0
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 3.8e-06 56.2 232 33.2
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 3.8e-06 56.2 232 30.2


User provided reference genes

Program Settings