Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 5.2e-179 630.9 323 100.0
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 1.0e-158 563.5 321 91.3
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 1.9e-144 516.2 321 83.2
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 3.2e-144 515.4 322 83.9
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 4.6e-143 511.5 319 81.2
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 1.2e-138 496.9 318 80.5
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 1.0e-137 493.8 320 81.2
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 2.1e-135 486.1 319 79.3
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 1.3e-134 483.4 321 79.4
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 3.3e-133 478.8 321 78.8
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 2.1e-132 476.1 324 77.2
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 1.8e-131 473.0 373 69.2
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 1.7e-129 466.5 323 75.2
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 5.9e-122 441.4 321 72.6
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 1.1e-120 437.2 321 71.7
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 3.6e-119 432.2 321 70.7
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.4e-118 430.3 367 64.0
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 3.0e-118 429.1 321 70.7
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 5.1e-118 428.3 321 71.0
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 4.8e-116 421.8 321 70.4
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 3.1e-115 419.1 318 70.8
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 5.3e-115 418.3 319 69.0
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 2.0e-114 416.4 321 69.8
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.4e-114 415.6 321 68.5
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 3.4e-114 415.6 314 68.2
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 7.7e-114 414.5 321 69.5
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.0e-113 414.1 321 68.8
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.0e-113 414.1 321 69.2
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 1.0e-113 414.1 319 68.0
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.8e-113 412.1 321 68.2
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.5e-112 409.5 321 68.5
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 3.2e-112 409.1 312 69.2
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 4.2e-112 408.7 321 67.3
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 7.2e-112 407.9 320 66.6
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 9.4e-112 407.5 321 67.3
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 4.7e-111 405.2 321 68.5
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 1.8e-110 403.3 315 66.0
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 2.3e-110 402.9 311 68.8
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 5.2e-110 401.7 321 67.9
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.1e-109 400.6 335 64.8
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 2.6e-109 399.4 322 65.5
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 3.3e-109 399.1 315 65.7
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 7.4e-109 397.9 321 67.3
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 1.7e-108 396.7 315 65.7
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 2.2e-108 396.4 321 65.4
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.2e-108 396.4 321 65.4
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 2.8e-108 396.0 308 68.5
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 3.7e-108 395.6 311 67.5
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 3.7e-108 395.6 319 66.1
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 4.8e-108 395.2 321 64.5
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 1.1e-107 394.0 321 65.7
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.4e-107 393.7 321 66.7
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 3.1e-107 392.5 319 65.8
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 4.1e-107 392.1 317 67.2
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 4.1e-107 392.1 322 66.8
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.7e-105 386.7 329 61.7
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 6.5e-105 384.8 360 59.7
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 8.5e-105 384.4 321 64.5
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 1.1e-104 384.0 316 64.2
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.9e-104 383.3 321 64.5
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 3.2e-104 382.5 314 65.3
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 3.2e-104 382.5 320 63.4
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 7.2e-104 381.3 327 62.7
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 1.4e-102 377.1 376 56.6
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 4.0e-102 375.6 329 61.1
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 2.0e-101 373.2 322 64.3
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 4.4e-101 372.1 336 62.2
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 7.5e-101 371.3 325 60.3
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.3e-100 370.5 342 58.2
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 1.1e-99 367.5 323 62.5
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.8e-99 366.7 321 62.0
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 2.4e-99 366.3 341 60.7
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.0e-97 360.9 323 61.9
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 1.1e-96 357.5 324 59.0
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 1.5e-96 357.1 302 64.9
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 2.5e-96 356.3 324 58.6
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 1.2e-95 354.0 300 63.7
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.2e-95 354.0 321 61.1
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 1.6e-95 353.6 321 60.1
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 3.6e-95 352.4 326 59.2
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 1.0e-94 350.9 317 58.4
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 4.0e-94 349.0 325 57.8
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 8.8e-94 347.8 327 58.7
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 8.8e-94 347.8 327 58.7
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 8.8e-94 347.8 322 61.2
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 1.2e-93 347.4 325 60.3
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 1.2e-93 347.4 324 59.0
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 9.8e-93 344.4 327 57.5
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 9.8e-93 344.4 327 57.5
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 9.8e-93 344.4 325 57.8
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 2.2e-92 343.2 322 60.6
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 3.7e-92 342.4 325 57.2
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 6.3e-92 341.7 325 57.2
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 6.3e-92 341.7 325 57.2
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 6.3e-92 341.7 325 57.2
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.1e-91 340.9 324 57.7
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 5.4e-91 338.6 324 57.1
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 7.0e-91 338.2 321 56.1
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 5.9e-90 335.1 329 57.8
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 2.3e-89 333.2 307 58.0
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 7.2e-88 328.2 257 68.5
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 1.7e-84 317.0 267 63.3
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.4e-83 313.9 321 56.4
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 1.8e-83 313.5 314 55.4
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 1.2e-82 310.8 307 57.0
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.0e-81 307.8 267 63.7
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 1.3e-81 307.4 322 53.1
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.7e-81 307.0 320 55.9
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 6.6e-81 305.1 360 51.9
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 2.9e-76 289.7 218 70.2
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 1.4e-70 270.8 307 52.4
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 3.1e-70 269.6 319 50.8
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 4.0e-70 269.2 321 51.4
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 2.9e-68 263.1 276 52.9
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 4.7e-63 245.7 319 46.4
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 4.0e-62 242.7 311 45.0
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 1.5e-56 224.2 325 43.7
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 1.1e-46 191.4 112 87.5
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 4.4e-45 186.0 321 37.1
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 2.4e-43 180.3 179 57.5
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 1.5e-40 171.0 110 79.1
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.9e-40 170.6 270 43.0
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 3.1e-38 163.3 185 45.9
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.3e-36 157.9 135 64.4
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 8.4e-36 155.2 202 48.0
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 2.1e-34 150.6 110 70.0
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 4.6e-34 149.4 105 70.5
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 6.7e-33 145.6 100 72.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 1.7e-28 131.0 237 39.2
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.6e-26 122.9 99 67.7
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 9.0e-22 108.6 337 30.0
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 1.4e-14 84.7 46 89.1
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 1.4e-14 84.7 46 89.1
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 1.4e-14 84.7 46 89.1
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 2.4e-14 84.0 74 60.8
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 9.0e-14 82.0 67 61.2
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.2e-13 81.6 94 48.9
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 1.5e-13 81.3 49 81.6
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 2.6e-13 80.5 45 86.7
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 8.5e-12 75.5 54 68.5
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 2.5e-11 73.9 70 52.9
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 3.0e-09 67.0 53 64.2
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 3.3e-08 63.5 51 66.7
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.2e-07 60.8 105 37.1
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 6.3e-07 59.3 36 77.8
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 2.4e-06 57.4 45 53.3


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