Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.7e-182 642.5 323 100.0
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.0e-142 510.4 333 80.5
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 1.8e-142 509.6 331 78.5
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.1e-140 502.7 335 78.5
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 5.3e-139 498.0 330 77.6
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.5e-138 496.5 332 77.7
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 3.4e-138 495.4 333 78.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 5.8e-138 494.6 328 77.4
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 1.7e-137 493.0 328 76.2
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.2e-135 486.9 333 74.8
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 5.1e-134 481.5 335 74.3
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 6.7e-134 481.1 335 73.7
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.9e-120 436.4 339 65.8
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.7e-116 423.3 349 61.0
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.5e-114 416.8 352 63.6
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 3.4e-114 415.6 349 64.2
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.8e-110 403.3 328 63.7
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.3e-110 402.9 324 64.2
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 8.8e-110 401.0 330 63.0
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.3e-108 397.1 332 59.3
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 8.2e-108 394.4 341 61.3
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 4.1e-107 392.1 333 59.2
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.0e-106 389.8 351 58.7
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 4.5e-106 388.7 325 59.4
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.0e-105 387.5 374 55.9
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 1.7e-105 386.7 323 61.0
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.5e-104 383.6 328 58.8
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.2e-103 380.6 335 56.4
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 3.6e-103 379.0 329 57.8
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 6.1e-103 378.3 323 58.5
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 6.1e-103 378.3 326 58.6
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.0e-102 377.5 349 58.2
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 8.8e-102 374.4 327 56.6
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.0e-101 373.2 324 57.4
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 4.4e-101 372.1 335 57.3
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.4e-101 372.1 340 58.5
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 5.7e-101 371.7 325 56.6
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 7.5e-101 371.3 328 59.8
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 7.5e-101 371.3 325 56.6
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 8.2e-100 367.9 326 56.4
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 3.1e-99 365.9 326 57.4
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 3.1e-99 365.9 301 62.1
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.0e-98 363.2 326 57.1
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 4.5e-98 362.1 326 57.1
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 5.9e-98 361.7 332 56.0
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.0e-97 360.9 333 58.9
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 3.8e-97 359.0 327 53.8
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 3.2e-96 355.9 324 55.6
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 4.2e-96 355.5 324 54.9
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 5.5e-96 355.1 328 55.5
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 2.7e-95 352.8 329 53.2
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 2.7e-95 352.8 337 56.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 8.0e-95 351.3 319 55.2
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.0e-94 350.9 327 52.0
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 3.0e-94 349.4 335 55.8
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 6.8e-94 348.2 335 55.2
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 8.8e-94 347.8 322 54.7
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 7.5e-93 344.7 351 55.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 4.8e-92 342.0 331 52.6
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.1e-91 340.9 328 51.8
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 1.1e-91 340.9 374 49.2
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 1.1e-91 340.9 338 55.0
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 2.0e-90 336.7 265 63.0
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.7e-90 336.3 336 52.4
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 2.7e-90 336.3 332 53.0
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 3.5e-90 335.9 353 51.0
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 5.9e-90 335.1 348 51.4
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.0e-89 334.3 305 53.4
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.9e-89 332.8 328 50.6
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 3.8e-89 332.4 310 53.5
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.1e-88 330.9 351 51.9
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.5e-88 330.5 358 50.0
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.9e-88 330.1 355 50.7
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 5.5e-88 328.6 338 51.5
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 7.2e-88 328.2 349 50.7
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.6e-87 327.0 351 49.6
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.0e-86 324.3 301 54.5
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 6.8e-86 321.6 325 51.1
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.6e-85 319.7 279 59.1
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 9.8e-85 317.8 346 53.2
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.7e-84 317.0 325 51.7
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 2.2e-84 316.6 324 50.9
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.8e-84 316.2 326 51.5
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 6.3e-84 315.1 302 53.6
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 4.1e-83 312.4 295 53.6
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 4.1e-83 312.4 316 50.3
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 5.4e-83 312.0 295 53.6
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 5.4e-83 312.0 301 52.8
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 3.5e-82 309.3 294 53.1
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.0e-81 307.8 294 52.7
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.0e-81 307.8 299 52.2
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 6.6e-81 305.1 333 49.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 3.3e-80 302.8 249 60.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 5.6e-80 302.0 327 49.5
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 7.3e-80 301.6 355 49.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 8.9e-78 294.7 345 46.7
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 7.5e-77 291.6 361 47.9
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.8e-77 291.2 336 46.7
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.7e-73 280.4 329 48.6
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.3e-65 254.2 228 53.5
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 3.2e-59 233.0 215 54.9
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.3e-57 227.6 211 55.9
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 4.3e-56 222.6 201 53.2
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 7.6e-53 211.8 177 57.1
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 8.7e-49 198.4 338 39.6
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.1e-48 198.0 338 39.1
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-45 188.0 243 39.5
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.9e-43 180.6 320 37.5
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.6e-42 177.6 318 36.2
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 3.4e-37 159.8 121 66.9
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.8e-37 159.1 253 35.6
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.3e-36 157.9 222 39.6
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 1.3e-36 157.9 203 37.9
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.2e-36 157.1 216 38.0
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.4e-35 153.7 256 34.4
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.1e-35 152.1 244 35.2
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.6e-34 151.0 202 41.1
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.5e-34 149.8 203 39.4
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.8e-33 147.5 202 39.6
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.9e-32 144.1 117 65.0
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-29 133.7 152 44.1
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 6.4e-28 129.0 229 33.2
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 2.3e-25 120.6 182 35.7
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.1e-19 101.7 82 62.2
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.1e-16 91.7 129 40.3
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 4.1e-14 83.2 93 45.2


User provided reference genes

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