Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 3.7e-132 474.9 251 100.0
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 2.6e-45 186.4 272 49.3
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 4.5e-45 185.7 268 48.1
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.1e-43 181.0 275 46.2
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 2.0e-40 170.2 275 46.2
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 9.7e-40 167.9 292 44.5
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 1.4e-38 164.1 282 45.0
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 2.4e-38 163.3 268 45.1
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.5e-35 154.1 286 43.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 4.2e-35 152.5 267 42.7
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 3.6e-34 149.4 279 41.9
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 2.6e-32 143.3 273 42.5
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 1.7e-31 140.6 304 38.2
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 2.8e-31 139.8 307 38.4
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 2.8e-31 139.8 272 40.8
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 8.3e-31 138.3 271 39.9
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.8e-30 137.1 266 39.8
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 2.4e-30 136.7 265 38.9
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 4.1e-30 136.0 283 41.0
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 2.0e-29 133.7 266 40.2
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 3.5e-29 132.9 275 40.4
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 3.5e-29 132.9 264 40.5
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 3.5e-29 132.9 274 38.7
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 5.9e-29 132.1 274 37.6
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.9e-29 132.1 274 39.8
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.1e-27 127.9 275 39.3
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.5e-27 126.7 275 38.2
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 9.4e-27 124.8 275 37.8
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.1e-26 123.6 265 39.2
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.8e-25 120.6 258 39.5
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.3e-25 120.2 273 38.5
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.0e-25 119.8 268 38.1
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 3.0e-25 119.8 267 39.3
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.0e-25 119.4 264 39.8
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 5.2e-25 119.0 275 37.1
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 6.8e-25 118.6 294 37.1
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.2e-24 117.9 273 36.6
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.5e-24 117.5 263 39.5
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.4e-24 116.3 265 38.1
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 3.4e-24 116.3 263 36.5
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.4e-24 116.3 267 38.2
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 3.4e-24 116.3 249 39.4
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 7.5e-24 115.2 267 37.1
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 9.8e-24 114.8 264 37.9
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.3e-23 114.4 278 36.7
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 2.2e-23 113.6 268 38.1
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 8.3e-23 111.7 284 35.9
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 8.3e-23 111.7 272 36.4
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 8.3e-23 111.7 246 37.0
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 1.1e-22 111.3 259 38.6
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 1.8e-22 110.5 262 37.0
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 7.0e-22 108.6 261 36.8
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 9.2e-22 108.2 262 34.7
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.2e-21 107.8 256 34.8
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 2.7e-21 106.7 276 36.2
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 2.7e-21 106.7 288 36.8
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 4.5e-21 105.9 263 36.1
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 5.9e-21 105.5 280 34.6
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.9e-21 105.5 275 33.1
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 1.0e-20 104.8 272 33.5
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.0e-20 104.8 269 35.3
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 3.8e-20 102.8 269 34.2
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 5.0e-20 102.4 266 34.2
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.0e-20 102.4 266 36.1
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 6.6e-20 102.1 291 32.6
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 1.1e-19 101.3 195 37.9
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.1e-19 101.3 267 34.1
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.5e-19 100.9 277 35.7
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.5e-19 100.9 237 34.2
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 4.3e-19 99.4 242 34.3
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 7.3e-19 98.6 264 32.2
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 9.5e-19 98.2 266 36.1
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 1.2e-18 97.8 282 34.0
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 1.2e-18 97.8 263 35.0
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 1.2e-18 97.8 267 34.8
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.2e-18 97.8 259 33.6
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 1.6e-18 97.4 257 35.8
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.1e-18 97.1 258 34.5
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.1e-18 97.1 271 33.6
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.7e-18 95.9 266 32.7
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 6.1e-18 95.5 282 35.5
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.1e-18 95.5 277 35.0
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 6.1e-18 95.5 269 31.2
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 6.1e-18 95.5 273 34.4
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 8.0e-18 95.1 254 33.9
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.0e-17 94.7 261 35.2
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 1.0e-17 94.7 273 33.0
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.0e-17 94.7 270 35.2
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.4e-17 94.4 252 32.9
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.4e-17 94.4 280 35.0
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.8e-17 94.0 274 34.3
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 4.0e-17 92.8 254 33.5
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 6.8e-17 92.0 246 32.1
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.8e-17 92.0 261 33.0
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 6.8e-17 92.0 271 32.1
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 8.9e-17 91.7 274 30.3
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 8.9e-17 91.7 269 34.6
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 1.2e-16 91.3 274 32.8
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 1.2e-16 91.3 311 30.9
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.2e-16 91.3 270 32.2
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 1.2e-16 91.3 246 33.3
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 1.2e-16 91.3 259 32.8
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 3.4e-16 89.7 269 30.5
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.4e-16 89.7 262 30.2
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 7.5e-16 88.6 269 30.1
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 7.5e-16 88.6 269 30.1
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 7.5e-16 88.6 274 33.2
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 9.8e-16 88.2 259 34.4
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.9e-15 86.7 260 34.6
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 2.9e-15 86.7 270 30.0
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 2.9e-15 86.7 241 35.3
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 4.9e-15 85.9 222 34.7
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 4.9e-15 85.9 260 29.2
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 4.9e-15 85.9 265 29.8
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 4.9e-15 85.9 211 33.2
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 1.1e-14 84.7 282 33.0
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 1.8e-14 84.0 129 44.2
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 3.2e-14 83.2 280 29.6
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 3.2e-14 83.2 227 31.7
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 4.1e-14 82.8 257 31.1
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 7.0e-14 82.0 268 30.2
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 9.2e-14 81.6 280 28.9
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 2.0e-13 80.5 266 29.3
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 2.0e-13 80.5 297 29.3
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 3.5e-13 79.7 268 29.1
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.0e-12 78.2 238 27.3
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-12 78.2 284 30.3
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 1.0e-12 78.2 294 31.6
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 1.3e-12 77.8 265 27.9
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 3.0e-12 76.6 278 28.8
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.9e-12 76.3 265 30.6
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 5.0e-12 75.9 276 29.3
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 6.6e-12 75.5 267 27.0
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 8.6e-12 75.1 267 27.0
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 8.6e-12 75.1 268 28.4
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 1.5e-11 74.3 267 26.6
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.9e-11 73.9 266 27.1
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 2.5e-11 73.6 260 29.2
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 3.3e-11 73.2 297 26.6
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 3.3e-11 73.2 250 32.0
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 4.3e-11 72.8 266 27.4
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 7.3e-11 72.0 236 29.7
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 9.5e-11 71.6 116 38.8
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 9.5e-11 71.6 260 28.8
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 9.5e-11 71.6 278 28.4
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 9.5e-11 71.6 280 29.3
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 9.5e-11 71.6 260 28.1
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 1.6e-10 70.9 235 29.8
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 2.1e-10 70.5 235 31.5
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 2.8e-10 70.1 257 27.6
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 3.6e-10 69.7 261 28.7
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.0e-09 68.2 187 32.1
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 2.3e-09 67.0 235 30.6
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 4.0e-09 66.2 261 28.4
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 4.0e-09 66.2 279 27.6
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 4.0e-09 66.2 261 28.4
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 6.8e-09 65.5 234 31.6
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 8.9e-09 65.1 235 29.4
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 1.2e-08 64.7 89 40.4
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 4.4e-08 62.8 263 26.6
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 9.8e-08 61.6 219 28.3
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 1.3e-07 61.2 97 35.1
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 1.7e-07 60.8 242 28.1
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 2.2e-07 60.5 214 29.9
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 2.2e-07 60.5 258 27.9
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 2.2e-07 60.5 193 28.0
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 4.9e-07 59.3 258 26.7
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 1.4e-06 57.8 184 31.5
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 5.4e-06 55.8 189 31.7
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 7.0e-06 55.5 184 29.3
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 9.2e-06 55.1 189 29.1


User provided reference genes

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