Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 4.2e-60 234.6 124 100.0
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 6.3e-48 194.1 127 85.8
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 3.4e-46 188.3 124 79.0
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 4.6e-43 177.9 113 82.3
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.7e-42 174.1 125 74.4
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 6.7e-42 174.1 124 77.4
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.1e-41 173.3 125 74.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 5.9e-38 161.0 124 69.4
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 3.8e-37 158.3 124 67.7
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 3.2e-36 155.2 126 70.6
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 5.5e-36 154.5 128 71.9
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 5.5e-36 154.5 124 67.7
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.7e-35 152.1 127 69.3
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 3.9e-34 148.3 124 63.7
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 3.9e-34 148.3 124 63.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.0e-33 146.0 124 63.7
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.6e-33 145.6 124 64.5
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 4.4e-33 144.8 124 62.9
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 7.4e-33 144.1 128 68.0
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 6.3e-32 141.0 130 62.3
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 8.2e-32 140.6 139 61.9
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.4e-31 139.8 125 62.4
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.8e-31 139.4 125 63.2
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.4e-31 139.0 127 59.8
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 5.9e-30 134.4 138 58.0
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.3e-29 133.3 133 61.7
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 1.7e-29 132.9 140 56.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.7e-29 132.9 138 57.2
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.8e-29 131.7 137 56.2
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 6.5e-29 131.0 124 62.1
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 6.5e-29 131.0 124 62.9
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.1e-28 130.2 130 59.2
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.9e-28 129.4 128 58.6
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.5e-28 129.0 120 62.5
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 9.4e-28 127.1 125 58.4
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 9.4e-28 127.1 125 60.0
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 1.2e-27 126.7 129 59.7
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.2e-27 126.7 126 60.3
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.6e-27 126.3 125 58.4
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 2.1e-27 125.9 125 58.4
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.7e-27 125.6 125 57.6
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.7e-27 125.6 129 55.0
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 6.1e-27 124.4 87 71.3
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 1.0e-26 123.6 125 57.6
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 1.8e-26 122.9 124 58.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 8.8e-26 120.6 86 73.3
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 7.5e-25 117.5 135 54.1
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 7.5e-25 117.5 168 43.5
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 6.3e-24 114.4 125 57.6
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 6.3e-24 114.4 125 57.6
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 1.4e-23 113.2 123 57.7
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.8e-23 112.8 125 50.4
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 3.1e-23 112.1 125 56.0
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 3.1e-23 112.1 125 56.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 3.1e-23 112.1 129 55.0
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.1e-23 111.7 125 56.8
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 4.1e-23 111.7 130 56.2
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 5.3e-23 111.3 85 68.2
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 7.0e-23 110.9 127 52.8
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.0e-23 110.9 127 54.3
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.2e-22 110.2 85 67.1
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 2.0e-22 109.4 129 51.2
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.5e-22 108.6 85 68.2
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.9e-22 107.8 130 52.3
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.3e-21 106.7 129 55.0
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.3e-21 106.7 126 53.2
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.2e-21 105.9 126 52.4
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 2.9e-21 105.5 91 61.5
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 6.5e-21 104.4 127 51.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.5e-20 102.4 89 65.2
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 3.2e-20 102.1 93 63.4
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.2e-20 101.7 130 46.9
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 7.2e-20 100.9 119 52.1
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.6e-19 99.8 94 61.7
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 2.1e-19 99.4 126 52.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.7e-19 98.2 131 47.3
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.8e-18 96.3 154 46.1
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.3e-18 95.9 124 48.4
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.3e-18 95.9 124 48.4
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.0e-18 95.5 98 56.1
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.0e-17 92.8 73 67.1
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.0e-17 92.8 124 47.6
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.6e-17 92.4 60 78.3
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 2.6e-17 92.4 70 70.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 2.6e-17 92.4 100 54.0
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 7.5e-17 90.9 86 61.6
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.8e-16 89.0 63 71.4
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 8.3e-16 87.4 65 66.2
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.4e-15 85.9 59 72.9
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 3.5e-14 82.0 102 50.0
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.9e-13 79.0 58 72.4
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.1e-12 77.0 76 55.3
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.2e-09 67.0 81 54.3
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.5e-09 66.6 46 76.1
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 4.4e-09 65.1 66 50.0
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 9.8e-09 63.9 94 42.6
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.4e-07 59.3 77 49.4
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 1.6e-06 56.6 82 45.1


User provided reference genes

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