Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0013352 Lotus japonicus HOM05D007509 ORTHO05D009525 4.7e-39 164.1 84 100.0
arahy.Tifrunner.gnm1.ann1.KQD9UV Arachis hypogaea HOM05D007509 ORTHO05D009525 4.1e-27 124.4 84 72.6
Glyma.10G054000 Glycine max HOM05D007509 ORTHO05D009525 5.4e-27 124.0 84 75.0
arahy.Tifrunner.gnm1.ann1.M25UX0 Arachis hypogaea HOM05D007509 ORTHO05D009525 7.0e-27 123.6 84 71.4
arahy.Tifrunner.gnm1.ann1.Z0MF7F Arachis hypogaea HOM05D007509 ORTHO05D009525 7.0e-27 123.6 84 71.4
Glyma.13G141100 Glycine max HOM05D007509 ORTHO05D009525 3.5e-26 121.3 84 73.8
Phvul.007G148600 Phaseolus vulgaris HOM05D007509 ORTHO05D009525 3.5e-26 121.3 84 72.6
Medtr1g063000 Medicago truncatula HOM05D007509 ORTHO05D009525 2.5e-24 115.2 84 67.9
Psat6g074800 Pisum sativum HOM05D007509 ORTHO05D009525 4.3e-24 114.4 84 71.4
TPR.G31192 Trifolium pratense HOM05D007509 ORTHO05D009525 9.5e-24 113.2 84 69.0
Lalb_Chr02g0155761 Lupinus albus HOM05D007509 ORTHO05D009525 3.6e-23 111.3 87 70.1
Actinidia32487 Actinidia chinensis HOM05D007509 ORTHO05D009525 1.4e-22 109.4 80 71.2
Cc06_g04400 Coffea canephora HOM05D007509 ORTHO05D009525 2.3e-22 108.6 74 70.3
TAR369G0282 Trochodendron aralioides HOM05D007509 ORTHO05D009525 6.8e-22 107.1 82 69.5
Medtr7g102320 Medicago truncatula HOM05D007509 ORTHO05D009525 1.2e-21 106.3 84 67.9
Dinv35801 Davidia involucrata HOM05D007509 ORTHO05D009525 5.8e-21 104.0 82 62.2
MD12G1108800 Malus domestica HOM05D007509 ORTHO05D009525 5.8e-21 104.0 81 67.9
GSVIVG01033662001 Vitis vinifera HOM05D007509 ORTHO05D009525 5.8e-21 104.0 79 69.6
FvH4_6g16590 Fragaria vesca HOM05D007509 ORTHO05D009525 9.9e-21 103.2 89 62.9
FAN14G0331 Fragaria x ananassa HOM05D007509 ORTHO05D009525 9.9e-21 103.2 89 62.9
TWI74G1449 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 9.9e-21 103.2 55 83.6
Nn6g35255 Nelumbo nucifera HOM05D007509 ORTHO05D009525 1.3e-20 102.8 86 64.0
Potri.006G122600 Populus trichocarpa HOM05D007509 ORTHO05D009525 1.3e-20 102.8 70 75.7
TAR633G0343 Trochodendron aralioides HOM05D007509 ORTHO05D009525 1.3e-20 102.8 59 81.4
Duzib093G1616 Durio zibethinus HOM05D007509 ORTHO05D009525 1.7e-20 102.4 89 61.8
FAN05G4600 Fragaria x ananassa HOM05D007509 ORTHO05D009525 1.7e-20 102.4 77 70.1
FAN05G4982 Fragaria x ananassa HOM05D007509 ORTHO05D009525 1.7e-20 102.4 77 70.1
Actinidia31324 Actinidia chinensis HOM05D007509 ORTHO05D009525 2.2e-20 102.1 73 69.9
FAN09G1001 Fragaria x ananassa HOM05D007509 ORTHO05D009525 2.2e-20 102.1 77 71.4
Gohir.A04G071200 Gossypium hirsutum HOM05D007509 ORTHO05D009525 2.2e-20 102.1 89 61.8
Gorai.009G414000 Gossypium raimondii HOM05D007509 ORTHO05D009525 2.2e-20 102.1 89 61.8
Gohir.D04G109900 Gossypium hirsutum HOM05D007509 ORTHO05D009525 2.9e-20 101.7 89 61.8
RcHm_v2.0_Chr3g0470531 Rosa chinensis HOM05D007509 ORTHO05D009525 3.7e-20 101.3 89 59.6
PGR004G0585 Punica granatum HOM05D007509 ORTHO05D009525 6.4e-20 100.5 78 65.4
Psat3g041640 Pisum sativum HOM05D007509 ORTHO05D009525 8.3e-20 100.1 84 64.3
CiPaw.09G170600 Carya illinoinensis HOM05D007509 ORTHO05D009525 1.1e-19 99.8 71 69.0
FAN02G1612 Fragaria x ananassa HOM05D007509 ORTHO05D009525 1.1e-19 99.8 89 61.8
Manes.07G043500 Manihot esculenta HOM05D007509 ORTHO05D009525 1.1e-19 99.8 74 68.9
Rhsim03G0090000 Rhododendron simsii HOM05D007509 ORTHO05D009525 1.4e-19 99.4 68 72.1
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.9e-19 99.0 89 59.6
Nn2g13827 Nelumbo nucifera HOM05D007509 ORTHO05D009525 2.4e-19 98.6 71 70.4
HanXRQChr14g0432941 Helianthus annuus HOM05D007509 ORTHO05D009525 3.2e-19 98.2 58 75.9
Ciclev10013275m.g Citrus clementina HOM05D007509 ORTHO05D009525 5.4e-19 97.4 53 83.0
Thecc.05G069500 Theobroma cacao HOM05D007509 ORTHO05D009525 7.1e-19 97.1 73 65.8
vmacro07305 Vaccinium macrocarpon HOM05D007509 ORTHO05D009525 7.1e-19 97.1 76 65.8
Cpa.g.sc92.105 Carica papaya HOM05D007509 ORTHO05D009525 9.2e-19 96.7 88 59.1
PSO339G5046 Papaver somniferum HOM05D007509 ORTHO05D009525 1.2e-18 96.3 54 81.5
TWI53G0287 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 1.2e-18 96.3 90 58.9
ECA246G0714 Erigeron canadensis HOM05D007509 ORTHO05D009525 1.6e-18 95.9 54 79.6
Peaxi162Scf00722g00034 Petunia axillaris HOM05D007509 ORTHO05D009525 2.1e-18 95.5 54 87.0
EL10Ac4g08317 Beta vulgaris HOM05D007509 ORTHO05D009525 2.7e-18 95.1 66 66.7
Atru.chr8.1768 Acer truncatum HOM05D007509 ORTHO05D009525 3.5e-18 94.7 82 61.0
Aqoxy2G01711 Aquilegia oxysepala HOM05D007509 ORTHO05D009525 3.5e-18 94.7 52 82.7
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 4.6e-18 94.4 82 61.0
Gohir.A09G145100 Gossypium hirsutum HOM05D007509 ORTHO05D009525 4.6e-18 94.4 72 68.1
Prupe.7G127400 Prunus persica HOM05D007509 ORTHO05D009525 4.6e-18 94.4 78 69.2
Migut.L01714 Erythranthe guttata HOM05D007509 ORTHO05D009525 6.0e-18 94.0 74 63.5
CDE08G0025 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 7.8e-18 93.6 82 58.5
AUR62036098 Chenopodium quinoa HOM05D007509 ORTHO05D009525 7.8e-18 93.6 83 54.2
Os02g0823600 Oryza sativa ssp. japonica HOM05D007509 ORTHO05D009525 7.8e-18 93.6 86 54.7
Aa31LG1G21690 Aethionema arabicum HOM05D007509 ORTHO05D009525 1.7e-17 92.4 89 52.8
Gorai.006G162100 Gossypium raimondii HOM05D007509 ORTHO05D009525 1.7e-17 92.4 72 65.3
Nitab4.5_0004476g0020 Nicotiana tabacum HOM05D007509 ORTHO05D009525 1.7e-17 92.4 82 58.5
Sed0001231 Sechium edule HOM05D007509 ORTHO05D009525 1.7e-17 92.4 85 55.3
Gohir.D09G141225 Gossypium hirsutum HOM05D007509 ORTHO05D009525 2.3e-17 92.0 72 65.3
QL07p042864 Quercus lobata HOM05D007509 ORTHO05D009525 3.0e-17 91.7 71 60.6
ATR0723G032 Amborella trichopoda HOM05D007509 ORTHO05D009525 3.9e-17 91.3 52 80.8
Sopen09g003160 Solanum pennellii HOM05D007509 ORTHO05D009525 5.1e-17 90.9 83 59.0
TPR.G32808 Trifolium pratense HOM05D001446 ORTHO05D001360 5.1e-17 90.9 71 66.2
Zm00001eb190910 Zea mays HOM05D007509 ORTHO05D009525 5.1e-17 90.9 70 60.0
Solyc09g008335.1 Solanum lycopersicum HOM05D007509 ORTHO05D009525 8.6e-17 90.1 83 59.0
PGSC0003DMG400003867 Solanum tuberosum HOM05D007509 ORTHO05D009525 1.1e-16 89.7 84 59.5
BolC9t60072H Brassica oleracea HOM05D007509 ORTHO05D009525 1.5e-16 89.4 83 60.2
CANSAT80G0537 Cannabis sativa HOM05D007509 ORTHO05D009525 2.5e-16 88.6 89 56.2
AUR62019539 Chenopodium quinoa HOM05D007509 ORTHO05D009525 2.5e-16 88.6 52 73.1
THA.LOC104816357 Tarenaya hassleriana HOM05D007509 ORTHO05D009525 4.3e-16 87.8 87 55.2
Sp6g39270 Schrenkiella parvula HOM05D007509 ORTHO05D009525 1.6e-15 85.9 90 54.4
MELO3C009368.2 Cucumis melo HOM05D007509 ORTHO05D009525 2.1e-15 85.5 85 52.9
CsaV3_3G036080 Cucumis sativus L. HOM05D007509 ORTHO05D009525 2.1e-15 85.5 85 52.9
BcaC06g32063 Brassica carinata HOM05D007509 ORTHO05D009525 2.8e-15 85.1 81 58.0
A10p32560 Brassica napus HOM05D007509 ORTHO05D009525 2.8e-15 85.1 84 58.3
BraA10t45291Z Brassica rapa HOM05D007509 ORTHO05D009525 2.8e-15 85.1 84 58.3
CDE02G4326 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 4.7e-15 84.3 83 56.6
C09p73360 Brassica napus HOM05D007509 ORTHO05D009525 6.2e-15 84.0 81 56.8
Thhalv10015146m.g Eutrema salsugineum HOM05D007509 ORTHO05D009525 8.1e-15 83.6 91 51.6
AL6G12840 Arabidopsis lyrata HOM05D007509 ORTHO05D009525 1.4e-14 82.8 90 52.2
Carub.0006s0228 Capsella rubella HOM05D007509 ORTHO05D009525 2.4e-14 82.0 90 51.1
CARHR209880 Cardamine hirsuta HOM05D007509 ORTHO05D009525 3.1e-14 81.6 90 52.2
AT5G03460 Arabidopsis thaliana HOM05D007509 ORTHO05D009525 4.0e-14 81.3 91 52.7
C02p01090 Brassica napus HOM05D007509 ORTHO05D009525 8.9e-14 80.1 81 54.3
BolC2t06099H Brassica oleracea HOM05D007509 ORTHO05D009525 8.9e-14 80.1 81 54.3
BraA02t04762Z Brassica rapa HOM05D007509 ORTHO05D009525 8.9e-14 80.1 81 54.3
unitig_0.g681 Utricularia gibba HOM05D007509 ORTHO05D009525 8.4e-12 73.6 45 75.6
Sed0008520 Sechium edule HOM05D007509 ORTHO05D009525 1.1e-11 73.2 67 53.7
Aa31LG3G2340 Aethionema arabicum HOM05D007509 ORTHO05D009525 5.4e-11 70.9 59 55.9
SMO147G0160 Selaginella moellendorffii HOM05D007509 ORTHO05D009525 2.1e-10 68.9 48 64.6
DCAR_020813 Daucus carota HOM05D007509 ORTHO05D009525 2.7e-10 68.6 48 58.3
HPP92_026749 Vanilla planifolia HOM05D007509 ORTHO05D009525 3.0e-09 65.1 62 53.2
Oeu056534.1 Olea europaea HOM05D007509 ORTHO05D009525 3.3e-08 61.6 32 78.1
Lsat_1_v5_gn_2_30820 Lactuca sativa HOM05D007509 ORTHO05D009525 3.6e-07 58.2 52 48.1
BcaB05g21842 Brassica carinata HOM05D007509 ORTHO05D009525 1.4e-06 56.2 58 44.8
TAR627G1182 Trochodendron aralioides HOM05D007509 ORTHO05D008594 6.9e-06 53.9 27 77.8


User provided reference genes

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