Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 2.5e-81 305.4 162 100.0
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 7.2e-28 127.9 139 54.0
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.2e-27 127.1 139 53.2
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.7e-24 116.7 142 50.0
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 2.2e-24 116.3 154 53.2
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 1.6e-22 110.2 140 47.1
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 3.5e-22 109.0 139 47.5
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 1.0e-21 107.5 138 52.9
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 5.0e-21 105.1 141 44.0
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 1.1e-20 104.0 144 45.1
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.1e-20 104.0 151 47.0
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 2.5e-20 102.8 162 41.4
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 3.2e-20 102.4 143 45.5
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 1.8e-18 96.7 151 43.7
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 6.8e-18 94.7 151 39.1
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 7.5e-17 91.3 153 41.8
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 7.5e-17 91.3 145 39.3
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.3e-16 90.5 148 41.2
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 3.7e-16 89.0 149 36.9
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 4.8e-16 88.6 140 40.0
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 4.8e-16 88.6 179 38.0
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 6.3e-16 88.2 134 40.3
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 4.1e-15 85.5 147 37.4
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 7.0e-15 84.7 133 42.9
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 7.0e-15 84.7 152 38.2
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 1.2e-14 84.0 124 41.9
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.0e-14 83.2 149 36.9
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.0e-14 83.2 152 37.5
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 4.5e-14 82.0 123 41.5
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 4.5e-14 82.0 152 36.8
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 7.7e-14 81.3 131 39.7
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 7.7e-14 81.3 140 40.0
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 7.7e-14 81.3 139 41.0
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.0e-13 80.9 133 45.9
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 1.0e-13 80.9 70 54.3
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 2.2e-13 79.7 148 39.2
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 3.8e-13 79.0 109 45.9
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 3.8e-13 79.0 139 40.3
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 5.0e-13 78.6 150 38.0
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 5.0e-13 78.6 126 44.4
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 6.5e-13 78.2 141 39.0
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 1.5e-12 77.0 125 36.0
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.9e-12 76.6 120 40.0
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.9e-12 76.6 141 39.0
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.9e-12 76.6 140 37.9
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.9e-12 76.6 120 40.0
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.9e-12 76.6 118 43.2
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 1.9e-12 76.6 144 42.4
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 5.5e-12 75.1 136 36.8
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 7.2e-12 74.7 143 39.9
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 9.5e-12 74.3 142 32.4
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 2.1e-11 73.2 131 41.2
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.6e-11 72.4 128 39.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 4.7e-11 72.0 124 39.5
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 6.1e-11 71.6 120 40.8
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 1.0e-10 70.9 137 36.5
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.0e-10 70.9 65 55.4
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.0e-10 70.9 65 55.4
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 1.8e-10 70.1 110 38.2
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.8e-10 70.1 152 34.9
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 3.0e-10 69.3 70 50.0
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 8.8e-10 67.8 154 35.1
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 1.2e-09 67.4 124 38.7
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 1.5e-09 67.0 128 35.2
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 2.0e-09 66.6 136 33.8
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.6e-09 66.2 150 34.7
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 2.6e-09 66.2 94 44.7
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 2.6e-09 66.2 152 34.9
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 3.4e-09 65.9 117 35.9
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 3.4e-09 65.9 65 53.8
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 3.4e-09 65.9 147 33.3
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 5.7e-09 65.1 125 32.0
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 7.5e-09 64.7 74 45.9
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 7.5e-09 64.7 123 39.0
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 1.3e-08 63.9 134 31.3
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 1.3e-08 63.9 147 30.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 1.3e-08 63.9 147 32.0
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.7e-08 63.5 113 35.4
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 2.2e-08 63.2 62 54.8
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 4.9e-08 62.0 150 33.3
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 6.3e-08 61.6 150 33.3
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 8.3e-08 61.2 72 37.5
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.1e-07 60.8 131 33.6
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.4e-07 60.5 141 31.2
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.8e-07 60.1 151 33.8
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.8e-07 60.1 75 45.3
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 3.1e-07 59.3 131 32.1
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 5.4e-07 58.5 152 30.9
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 7.0e-07 58.2 97 41.2
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.2e-06 57.4 143 31.5
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.6e-06 57.0 70 44.3
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 3.5e-06 55.8 73 41.1


User provided reference genes

Program Settings