Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0011924 Lotus japonicus HOM05D007935 ORTHO05D007393 6.8e-84 313.9 156 100.0
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.5e-35 153.3 158 57.6
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.9e-34 149.1 158 57.6
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.0e-30 136.3 166 53.6
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 3.3e-30 135.6 169 52.7
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.8e-28 129.8 166 51.2
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 2.0e-27 126.3 165 52.1
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 5.0e-26 121.7 169 49.7
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 2.1e-24 116.3 166 48.2
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.7e-24 115.9 161 46.6
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 6.7e-23 111.3 161 45.3
Phvul.007G090200 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 4.4e-22 108.6 158 46.2
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 8.2e-21 104.4 162 46.9
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 3.1e-20 102.4 165 43.0
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 9.4e-17 90.9 171 39.8
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 1.1e-14 84.0 160 39.4
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 7.4e-14 81.3 180 37.2
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 8.2e-13 77.8 169 39.1
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 1.1e-12 77.4 169 36.7
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 3.5e-11 72.4 160 33.1
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 8.5e-10 67.8 157 33.8
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 1.6e-08 63.5 165 32.7
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.7e-08 62.8 155 32.9
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.6e-08 62.4 174 28.2
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 3.6e-08 62.4 176 33.0
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 4.7e-08 62.0 155 32.9
VMungo0720G2340 Vigna mungo HOM05D000170 ORTHO05D007393 8.0e-08 61.2 102 46.1
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.4e-07 60.5 162 33.3
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 5.2e-07 58.5 161 32.3
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 8.8e-07 57.8 174 29.3
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 1.2e-06 57.4 158 34.8
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 2.6e-06 56.2 135 34.8
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 3.3e-06 55.8 181 24.9
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 4.4e-06 55.5 177 29.4
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 5.7e-06 55.1 165 34.5
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 5.7e-06 55.1 155 32.3
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 5.7e-06 55.1 152 30.9


User provided reference genes

Program Settings