Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 0.0e+00 1349.7 773 100.0
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.3e-273 946.4 675 74.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 3.9e-273 944.9 782 76.1
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 2.6e-261 905.6 788 73.0
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 3.4e-261 905.2 782 74.6
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 6.1e-258 894.4 786 73.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 3.7e-255 885.2 777 72.7
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.8e-254 882.9 673 71.9
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.7e-250 869.0 782 72.6
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 8.8e-249 864.0 779 71.9
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.1e-248 863.6 779 71.8
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.6e-168 596.7 727 56.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 3.4e-168 596.3 730 56.7
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.0e-164 584.7 738 55.0
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 2.3e-164 583.6 686 50.4
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.1e-163 581.3 770 53.1
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 5.3e-161 572.4 730 54.8
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.2e-160 571.2 733 54.4
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-159 567.8 730 54.5
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.7e-159 567.4 857 49.7
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 3.9e-156 556.2 677 47.7
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.7e-154 549.7 730 54.7
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.8e-154 549.3 789 52.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.2e-149 534.6 714 54.3
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.1e-149 533.9 760 53.0
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.7e-149 533.5 685 47.2
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 7.9e-149 531.9 793 51.7
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.3e-148 531.2 789 51.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.6e-146 524.2 662 47.1
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 8.2e-146 521.9 715 51.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.1e-145 519.6 751 52.7
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.1e-145 519.6 708 51.8
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 6.9e-145 518.8 683 55.6
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 5.9e-144 515.8 788 51.3
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 8.5e-143 511.9 746 51.2
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 3.9e-140 503.1 603 48.6
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.2e-138 495.4 681 44.6
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.5e-136 489.6 748 49.5
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.2e-135 487.3 845 47.2
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 5.7e-131 472.6 638 55.5
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.3e-130 471.5 747 47.4
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.4e-126 458.0 633 42.8
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.9e-126 457.6 546 48.5
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 5.5e-126 456.1 797 45.3
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 9.4e-126 455.3 661 52.6
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 6.1e-125 452.6 831 46.0
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.5e-123 448.0 527 48.6
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 7.4e-123 445.7 721 49.0
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 3.1e-121 440.3 721 48.5
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.7e-117 426.4 708 46.8
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.2e-116 422.9 751 46.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.6e-115 420.6 719 47.3
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 4.4e-115 419.9 765 46.9
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 4.4e-115 419.9 712 48.0
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 7.5e-115 419.1 716 45.5
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 9.7e-115 418.7 621 42.5
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 9.7e-115 418.7 702 46.9
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 1.3e-114 418.3 776 44.2
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.8e-113 414.5 672 39.7
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.8e-113 414.5 783 44.8
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.6e-112 411.4 782 44.6
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.6e-112 411.4 651 38.4
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 2.7e-112 410.6 789 44.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 4.5e-112 409.8 752 46.1
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 2.2e-111 407.5 704 47.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.5e-110 404.1 778 44.6
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 5.5e-110 402.9 715 46.3
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 7.2e-110 402.5 696 48.4
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.0e-108 398.7 716 46.2
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.2e-107 395.2 749 45.1
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 7.5e-107 392.5 670 47.5
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.7e-106 390.2 743 45.6
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 3.7e-106 390.2 657 48.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 4.1e-105 386.7 706 45.3
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.7e-103 381.3 479 46.3
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.9e-102 377.9 535 43.4
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 4.0e-100 370.2 671 46.2
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 1.5e-99 368.2 638 47.8
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 4.1e-97 360.1 576 53.1
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 2.9e-95 354.0 480 45.2
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 2.5e-94 350.9 550 53.1
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.7e-82 311.6 620 34.5
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 5.4e-81 306.6 574 46.0
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 2.5e-78 297.7 640 43.6
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 7.3e-78 296.2 588 45.1
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.2e-75 288.9 597 33.2
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 6.0e-72 276.6 545 47.2
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 7.6e-67 259.6 725 36.7
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 4.2e-65 253.8 723 32.2
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.6e-61 240.7 230 52.6
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.5e-59 235.3 447 51.0
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 6.6e-55 219.9 521 32.6
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.6e-53 214.2 454 48.9
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.8e-51 206.8 343 39.7
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 4.6e-48 197.2 475 33.1
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 7.4e-46 189.9 275 44.7
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.4e-42 176.4 175 54.3
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 7.9e-40 169.9 644 28.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.5e-35 155.6 418 47.1
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.7e-26 125.6 221 38.9
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 2.5e-25 121.7 190 38.9
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 5.5e-25 120.6 81 75.3
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-20 106.3 217 39.6
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 1.1e-20 106.3 254 33.1
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.8e-20 105.5 304 32.6
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 3.1e-20 104.8 77 64.9
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.7e-16 90.9 158 39.9
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 9.7e-14 83.2 310 25.8
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 9.7e-14 83.2 78 53.8
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.7e-13 82.4 47 78.7
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.7e-13 81.3 153 37.9
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 4.2e-09 67.8 67 49.3
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 8.8e-07 60.1 205 24.9


User provided reference genes

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