Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 2.8e-109 398.7 209 100.0
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.3e-87 325.9 209 83.3
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.1e-84 317.0 209 81.3
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.8e-84 316.2 210 81.4
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 7.0e-84 314.3 209 80.4
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 3.8e-82 308.5 210 81.4
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 2.5e-81 305.8 209 79.4
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.2e-81 305.1 211 79.6
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 3.7e-77 292.0 211 77.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 4.9e-77 291.6 211 76.3
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 6.3e-77 291.2 209 75.6
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 8.3e-77 290.8 211 75.8
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.2e-70 270.4 222 70.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 6.2e-64 248.1 211 65.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.2e-62 243.8 212 67.5
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.6e-62 242.7 211 64.5
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 6.4e-61 238.0 207 63.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 7.0e-60 234.6 207 62.8
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.6e-59 233.4 201 65.7
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.1e-59 233.0 213 63.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 6.0e-59 231.5 185 68.1
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.7e-58 229.9 212 64.2
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 3.0e-58 229.2 199 64.3
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 1.9e-57 226.5 207 61.8
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 5.6e-57 224.9 211 60.7
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 5.6e-57 224.9 212 62.7
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 9.5e-57 224.2 182 65.9
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 9.5e-57 224.2 189 65.1
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.6e-56 223.4 211 61.1
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.6e-56 223.4 179 68.2
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.8e-56 222.6 211 61.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 3.6e-56 222.2 204 61.8
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 6.2e-56 221.5 211 61.6
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.4e-55 220.3 183 67.2
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.8e-55 219.9 145 80.0
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.8e-55 219.9 209 60.3
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 5.2e-55 218.4 199 62.3
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.5e-54 216.9 205 60.5
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 2.0e-54 216.5 239 55.2
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 4.4e-54 215.3 211 59.7
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 7.5e-54 214.5 212 61.8
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.7e-53 213.4 182 63.2
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.2e-53 213.0 211 60.2
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.7e-53 212.2 199 62.3
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 8.3e-53 211.1 190 63.2
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.1e-52 210.7 211 60.2
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 2.4e-52 209.5 179 64.8
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.4e-52 209.5 171 67.8
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.2e-52 209.1 179 65.9
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 7.1e-52 208.0 194 62.4
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 9.2e-52 207.6 208 60.1
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.2e-51 207.2 168 66.7
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 2.1e-51 206.5 212 56.1
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 2.1e-51 206.5 209 56.9
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.1e-51 206.5 184 65.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 2.7e-51 206.1 214 59.8
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 3.5e-51 205.7 168 67.3
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 4.6e-51 205.3 184 64.7
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 4.6e-51 205.3 214 59.8
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 4.6e-51 205.3 209 57.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 7.8e-51 204.5 186 65.1
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.0e-50 204.1 181 63.0
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.7e-50 203.4 184 64.7
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 1.5e-49 200.3 166 68.1
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.9e-49 199.9 213 58.7
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 2.5e-49 199.5 209 57.9
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 2.5e-49 199.5 206 58.3
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.3e-49 199.1 151 70.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 4.3e-49 198.7 150 70.7
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.2e-48 197.2 150 70.0
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.6e-48 196.8 167 68.3
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.6e-48 196.8 144 72.9
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.6e-48 196.8 215 57.2
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.1e-48 196.4 172 64.5
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 2.1e-48 196.4 207 57.0
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 3.6e-48 195.7 166 63.3
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 3.6e-48 195.7 170 63.5
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 6.2e-48 194.9 163 66.9
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.2e-48 194.9 183 60.7
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 6.2e-48 194.9 184 59.8
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.1e-47 194.1 188 59.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.4e-47 193.7 144 72.2
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.0e-47 192.2 181 63.0
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.0e-47 192.2 181 63.0
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 5.2e-47 191.8 164 64.0
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.5e-46 190.3 181 62.4
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 9.9e-46 187.6 210 53.8
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.3e-45 187.2 140 68.6
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.2e-45 186.4 194 56.2
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.4e-44 183.7 135 70.4
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.2e-44 182.2 169 60.4
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 4.2e-44 182.2 205 56.1
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 5.4e-44 181.8 182 58.2
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 5.4e-44 181.8 143 68.5
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 9.2e-44 181.0 144 67.4
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 5.1e-42 175.3 128 73.4
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 1.1e-41 174.1 147 65.3
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.3e-41 171.4 189 52.4
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 8.1e-40 167.9 183 53.6
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 5.6e-33 145.2 173 47.4
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 7.3e-33 144.8 168 49.4
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.2e-32 141.7 133 61.7
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 4.0e-31 139.0 101 71.3
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 7.1e-28 128.3 136 47.1
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.3e-26 123.2 143 51.0
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.5e-25 120.6 157 42.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 2.9e-21 106.3 110 57.3
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.2e-19 100.9 70 72.9
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.6e-16 90.5 92 51.1
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 2.0e-06 57.0 187 27.3


User provided reference genes

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