Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.5e-116 422.9 223 100.0
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.5e-92 343.2 223 83.0
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 5.3e-90 334.7 223 78.0
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 2.7e-89 332.4 223 77.6
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 3.5e-89 332.0 224 77.2
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 6.5e-88 327.8 175 89.1
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 6.5e-88 327.8 175 89.1
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.5e-87 326.6 223 77.6
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 8.0e-86 320.9 170 90.0
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 4.4e-84 315.1 224 75.4
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.7e-83 312.0 172 84.9
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 6.3e-83 311.2 176 81.8
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 8.3e-83 310.8 170 85.3
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 4.1e-82 308.5 169 85.2
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.3e-80 303.5 175 81.7
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 6.5e-80 301.2 176 80.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 4.2e-79 298.5 171 82.5
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 4.2e-79 298.5 171 81.9
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 9.4e-79 297.4 165 84.2
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 2.7e-78 295.8 175 81.7
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 3.6e-78 295.4 175 79.4
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 8.0e-78 294.3 168 81.5
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.0e-77 293.9 171 81.3
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 3.0e-77 292.4 174 81.0
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 6.8e-77 291.2 175 78.9
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 6.8e-77 291.2 172 79.7
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.2e-76 290.4 169 81.1
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.5e-76 290.0 172 81.4
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 3.4e-76 288.9 174 78.7
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 4.4e-76 288.5 171 79.5
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.7e-75 286.6 170 78.8
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.8e-75 285.8 173 77.5
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.7e-75 285.4 172 77.9
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.9e-75 285.0 170 77.6
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 4.9e-75 285.0 173 77.5
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.1e-74 283.9 168 81.5
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.1e-74 283.9 169 78.7
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.4e-74 283.5 170 77.6
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.8e-74 283.1 176 76.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 2.4e-74 282.7 176 75.6
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 3.1e-74 282.3 170 77.6
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 5.4e-74 281.6 177 74.6
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 5.4e-74 281.6 171 76.0
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.2e-73 280.4 176 75.0
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.0e-73 279.6 172 76.2
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 2.0e-73 279.6 170 78.2
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 2.7e-73 279.3 177 76.3
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 3.5e-73 278.9 174 78.7
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 3.5e-73 278.9 203 66.5
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 4.5e-73 278.5 161 80.7
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 5.9e-73 278.1 176 74.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 5.9e-73 278.1 215 65.1
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 5.9e-73 278.1 176 76.1
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 7.7e-73 277.7 184 76.1
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 1.7e-72 276.6 166 77.7
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.7e-72 276.6 195 77.4
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 5.0e-72 275.0 181 71.8
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 1.1e-71 273.9 172 74.4
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.5e-71 273.5 173 74.0
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 7.3e-71 271.2 173 74.6
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 4.7e-70 268.5 171 74.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.0e-70 267.7 172 74.4
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 8.0e-70 267.7 204 66.2
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.0e-69 267.3 144 86.8
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.8e-69 266.5 184 70.7
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.8e-69 266.5 180 70.6
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.8e-69 266.5 226 62.4
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 1.8e-69 266.5 168 73.8
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.2e-68 263.8 225 61.8
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 3.4e-68 262.3 174 75.3
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 7.5e-68 261.2 171 73.1
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 9.8e-68 260.8 165 75.8
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.8e-68 260.8 168 73.8
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.7e-67 260.0 177 71.8
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 2.2e-67 259.6 178 69.1
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.7e-67 258.8 221 62.9
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 4.9e-67 258.5 166 71.7
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 2.4e-66 256.1 166 71.7
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 2.0e-65 253.1 223 60.1
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 1.3e-64 250.4 179 68.2
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 7.3e-63 244.6 152 77.6
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 6.2e-62 241.5 249 52.2
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.0e-61 240.7 149 77.2
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.8e-61 240.0 208 59.6
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 9.8e-60 234.2 139 77.0
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.7e-59 232.3 147 76.2
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 3.7e-59 232.3 147 75.5
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 3.7e-59 232.3 140 77.9
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.7e-57 226.1 147 72.1
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 5.4e-50 201.8 122 77.0
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.1e-49 199.9 122 75.4
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 2.1e-49 199.9 122 76.2
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.3e-48 196.4 124 74.2
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.1e-46 189.9 218 48.6
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.7e-43 180.3 184 49.5
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.5e-39 167.2 174 46.6
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.5e-31 139.8 77 84.4
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 6.2e-30 135.2 74 81.1
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.2e-20 104.4 239 27.6
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.6e-12 75.1 120 48.3
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 8.2e-06 55.1 36 75.0
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 8.2e-06 55.1 54 53.7


User provided reference genes

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