Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0010223 Lotus japonicus HOM05D008297 ORTHO05D010093 1.6e-64 249.2 121 100.0
Glyma.10G071300 Glycine max HOM05D008297 ORTHO05D010093 5.0e-34 147.9 125 68.8
Medtr1g060240 Medicago truncatula HOM05D008297 ORTHO05D010093 2.3e-31 139.0 112 72.3
Lalb_Chr06g0173271 Lupinus albus HOM05D008297 ORTHO05D010093 2.0e-30 136.0 128 60.9
Phvul.007G229200 Phaseolus vulgaris HOM05D008297 ORTHO05D010093 1.4e-28 129.8 124 59.7
VMungo0720G0603 Vigna mungo HOM05D008297 ORTHO05D010093 9.2e-28 127.1 125 57.6
TPR.G24588 Trifolium pratense HOM05D008297 ORTHO05D010093 2.1e-24 115.9 114 63.2
Psat6g014040 Pisum sativum HOM05D008297 ORTHO05D010093 2.2e-21 105.9 121 60.3
CiPaw.09G012800 Carya illinoinensis HOM05D008297 ORTHO05D010093 2.7e-19 99.0 123 50.4
FvH4_6g18470 Fragaria vesca HOM05D008297 ORTHO05D010093 6.0e-19 97.8 101 52.5
FAN14G3031 Fragaria x ananassa HOM05D008297 ORTHO05D010093 6.0e-19 97.8 101 52.5
Cfa016593 Carpinus fangiana HOM05D008297 ORTHO05D010093 1.3e-18 96.7 101 52.5
CiPaw.10G008500 Carya illinoinensis HOM05D008297 ORTHO05D010093 1.3e-18 96.7 110 51.8
FAN02G0390 Fragaria x ananassa HOM05D008297 ORTHO05D010093 5.0e-18 94.7 101 52.5
CANSAT80G2610 Cannabis sativa HOM05D008297 ORTHO05D010093 1.1e-17 93.6 102 54.9
Dinv31675 Davidia involucrata HOM05D008297 ORTHO05D010093 1.1e-17 93.6 126 49.2
FAN09G3035 Fragaria x ananassa HOM05D008297 ORTHO05D010093 1.1e-17 93.6 101 50.5
FAN05G0196 Fragaria x ananassa HOM05D008297 ORTHO05D010093 2.5e-17 92.4 94 56.4
arahy.Tifrunner.gnm1.ann1.MHCF32 Arachis hypogaea HOM05D057207 ORTHO05D010093 3.3e-17 92.0 111 53.2
arahy.Tifrunner.gnm1.ann1.SCUD5X Arachis hypogaea HOM05D057207 ORTHO05D010093 3.3e-17 92.0 111 53.2
FAN05G0841 Fragaria x ananassa HOM05D008297 ORTHO05D010093 5.6e-17 91.3 101 51.5
Haze_19594 Corylus avellana HOM05D008297 ORTHO05D010093 7.3e-17 90.9 102 51.0
QL07p039287 Quercus lobata HOM05D008297 ORTHO05D010093 9.5e-17 90.5 125 50.4
MD12G1023800 Malus domestica HOM05D008297 ORTHO05D010093 3.6e-16 88.6 95 51.6
Prupe.7G112700 Prunus persica HOM05D008297 ORTHO05D010093 6.2e-16 87.8 86 53.5
Thecc.05G087300 Theobroma cacao HOM05D008297 ORTHO05D010093 1.2e-14 83.6 102 48.0
PGR004G2620 Punica granatum HOM05D008297 ORTHO05D010093 1.5e-14 83.2 91 48.4
MD14G1021000 Malus domestica HOM05D008297 ORTHO05D010093 4.4e-14 81.6 95 45.3
Duzib093G1918 Durio zibethinus HOM05D008297 ORTHO05D010093 1.4e-12 76.6 57 68.4
Gohir.D01G196400 Gossypium hirsutum HOM05D008297 ORTHO05D010093 5.4e-12 74.7 56 69.6
Gorai.002G240600 Gossypium raimondii HOM05D008297 ORTHO05D010093 5.4e-12 74.7 56 69.6
Rhsim04G0131800 Rhododendron simsii HOM05D008297 ORTHO05D010093 9.2e-12 73.9 120 39.2
TWI74G0146 Tripterygium wilfordii HOM05D008297 ORTHO05D010093 9.2e-12 73.9 77 50.6
MSTRG.19253 Avicennia marina HOM05D008297 ORTHO05D010093 1.2e-11 73.6 55 70.9
Cpa.g.sc5.36 Carica papaya HOM05D008297 ORTHO05D010093 1.2e-11 73.6 55 67.3
Ciclev10013717m.g Citrus clementina HOM05D008297 ORTHO05D010093 1.2e-11 73.6 64 62.5
Manes.09G056350 Manihot esculenta HOM05D008297 ORTHO05D010093 1.2e-11 73.6 82 56.1
Manes.08G024300 Manihot esculenta HOM05D008297 ORTHO05D010093 2.1e-11 72.8 56 64.3
Potri.004G142600 Populus trichocarpa HOM05D008297 ORTHO05D010093 2.1e-11 72.8 56 60.7
COL.COLO4_29766 Corchorus olitorius HOM05D008297 ORTHO05D010093 4.6e-11 71.6 54 66.7
Gohir.A01G207000 Gossypium hirsutum HOM05D008297 ORTHO05D010093 6.0e-11 71.2 56 66.1
Oeu056894.1 Olea europaea HOM05D008297 ORTHO05D010093 7.8e-11 70.9 53 66.0
RcHm_v2.0_Chr3g0473001 Rosa chinensis HOM05D008297 ORTHO05D010093 7.8e-11 70.9 76 57.9
Actinidia31275 Actinidia chinensis HOM05D008297 ORTHO05D010093 1.0e-10 70.5 98 46.9
AUR62033499 Chenopodium quinoa HOM05D008297 ORTHO05D010093 1.3e-10 70.1 55 60.0
AUR62028547 Chenopodium quinoa HOM05D008297 ORTHO05D010093 3.9e-10 68.6 88 43.2
CsaV3_3G037180 Cucumis sativus L. HOM05D008297 ORTHO05D010093 8.6e-10 67.4 83 47.0
MELO3C009464.2 Cucumis melo HOM05D008297 ORTHO05D010093 1.1e-09 67.0 83 45.8
Nn6g34936 Nelumbo nucifera HOM05D008297 ORTHO05D010093 1.1e-09 67.0 54 63.0
Sed0021862 Sechium edule HOM05D008297 ORTHO05D010093 1.9e-09 66.2 80 50.0
EL10Ac7g16932 Beta vulgaris HOM05D008297 ORTHO05D010093 3.3e-09 65.5 55 60.0
ECA233G2556 Erigeron canadensis HOM05D000444 ORTHO05D000489 4.3e-09 65.1 58 58.6
Nn5g28531 Nelumbo nucifera HOM05D008297 ORTHO05D010093 5.6e-09 64.7 55 61.8
MSTRG.5838 Avicennia marina HOM05D008297 ORTHO05D010093 2.1e-08 62.8 53 58.5
Aqoxy6G02838 Aquilegia oxysepala HOM05D008297 ORTHO05D010093 4.7e-08 61.6 75 48.0
Ah.15g090940 Amaranthus hybridus HOM05D008297 ORTHO05D010093 6.2e-08 61.2 55 54.5
Eucgr.A01506 Eucalyptus grandis HOM05D008297 ORTHO05D010093 6.2e-08 61.2 106 34.0
MBI17_g01565_MAGBIO Magnolia biondii HOM05D008297 ORTHO05D010093 8.1e-08 60.8 90 40.0
Migut.J01050 Erythranthe guttata HOM05D008297 ORTHO05D010093 1.4e-07 60.1 69 52.2
ClCG10G019060 Citrullus lanatus HOM05D008297 ORTHO05D010093 4.0e-07 58.5 66 47.0
TAR633G2623 Trochodendron aralioides HOM05D008297 ORTHO05D010093 4.0e-07 58.5 94 42.6
Carub.0004s1804 Capsella rubella HOM05D012350 ORTHO05D010093 6.8e-07 57.8 62 54.8
CiPaw.10G008800 Carya illinoinensis HOM05D008297 ORTHO05D010093 1.2e-06 57.0 76 46.1
Lsat_1_v5_gn_6_24180 Lactuca sativa HOM05D008297 ORTHO05D010093 4.4e-06 55.1 48 58.3


User provided reference genes

Program Settings