Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 6.6e-66 253.8 123 100.0
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 5.0e-21 104.8 64 84.4
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 7.4e-17 90.9 73 67.1
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 2.4e-15 85.9 73 63.0
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.2e-14 83.6 73 61.6
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.0e-14 82.8 73 61.6
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.3e-13 80.1 71 56.3
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.3e-13 80.1 71 56.3
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 5.5e-12 74.7 70 58.6
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.6e-11 73.2 72 59.7
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 6.1e-11 71.2 72 58.3
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 7.9e-11 70.9 72 55.6
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 6.7e-10 67.8 71 49.3
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 2.0e-09 66.2 68 51.5
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.6e-09 65.9 68 50.0
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.3e-08 63.5 70 45.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.2e-08 62.8 71 46.5
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 2.8e-08 62.4 77 44.2
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.7e-08 62.0 71 50.7
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.7e-08 62.0 68 47.1
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 4.8e-08 61.6 71 49.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 6.3e-08 61.2 69 49.3
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 8.2e-08 60.8 70 45.7
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 8.2e-08 60.8 70 45.7
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 8.2e-08 60.8 71 50.7
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 1.1e-07 60.5 72 44.4
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.4e-07 60.1 72 47.2
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.4e-07 60.1 68 47.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.8e-07 59.7 69 50.7
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.8e-07 59.7 69 50.7
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.8e-07 59.7 72 48.6
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 3.1e-07 58.9 63 49.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 3.1e-07 58.9 67 50.7
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 4.1e-07 58.5 71 47.9
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 7.0e-07 57.8 69 47.8
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 9.1e-07 57.4 69 47.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.2e-06 57.0 72 43.1
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.2e-06 57.0 76 43.4
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.0e-06 56.2 76 48.7
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.6e-06 55.8 69 46.4
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 2.6e-06 55.8 69 46.4
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.6e-06 55.8 69 47.8
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.4e-06 55.5 70 45.7
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.4e-06 55.5 69 46.4
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.4e-06 55.5 68 47.1
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 3.4e-06 55.5 73 45.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 7.7e-06 54.3 73 43.8
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 7.7e-06 54.3 69 44.9


User provided reference genes

Program Settings