Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0009547 Lotus japonicus HOM05D012399 ORTHO05D007522 1.4e-136 489.6 248 100.0
Lj3g0025415 Lotus japonicus HOM05D000045 ORTHO05D007522 1.7e-129 466.1 270 90.0
LjContig00302g0011664 Lotus japonicus HOM05D000045 ORTHO05D007522 1.7e-129 466.1 270 90.0
Lj6g0017880 Lotus japonicus HOM05D000045 ORTHO05D007522 1.1e-88 330.5 283 66.8
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 2.5e-24 116.7 232 34.9
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 8.2e-23 111.7 233 34.8
Lj4g0016999 Lotus japonicus HOM05D000045 ORTHO05D007522 5.3e-22 109.0 199 33.7
TPR.G17630 Trifolium pratense HOM05D000045 ORTHO05D000067 4.2e-19 99.4 158 32.9
Lj4g0026725 Lotus japonicus HOM05D012399 ORTHO05D007522 7.2e-19 98.6 116 43.1
Lj1g0023623 Lotus japonicus HOM05D000045 ORTHO05D007522 4.6e-18 95.9 181 32.6
TPR.G37658 Trifolium pratense HOM05D000045 ORTHO05D000067 4.6e-18 95.9 227 31.3
Lj2g0009070 Lotus japonicus HOM05D000045 ORTHO05D000067 2.3e-17 93.6 227 32.6
Lj6g0007124 Lotus japonicus HOM05D000045 ORTHO05D000067 6.7e-17 92.0 189 30.7
TPR.G39767 Trifolium pratense HOM05D000045 ORTHO05D007522 6.7e-17 92.0 213 29.1
Lj2g0009580 Lotus japonicus HOM05D000045 ORTHO05D007522 2.0e-16 90.5 219 30.1
Lj1g0021005 Lotus japonicus HOM05D000045 ORTHO05D007522 2.5e-16 90.1 178 32.0
Lj6g0023979 Lotus japonicus HOM05D058933 ORTHO05D007522 2.5e-16 90.1 286 29.4
arahy.Tifrunner.gnm1.ann1.8433TV Arachis hypogaea HOM05D010283 ORTHO05D013006 1.3e-15 87.8 186 31.2
arahy.Tifrunner.gnm1.ann1.E92V9Y Arachis hypogaea HOM05D000045 ORTHO05D013006 2.8e-15 86.7 186 30.1
TPR.G9983 Trifolium pratense HOM05D000045 ORTHO05D007522 6.3e-15 85.5 248 27.0
Lj1g0017039 Lotus japonicus HOM05D000045 ORTHO05D007522 9.1e-14 81.6 224 28.6
Lj4g0024414 Lotus japonicus HOM05D012399 ORTHO05D007522 9.1e-14 81.6 123 39.8
TPR.G40841 Trifolium pratense HOM05D000045 ORTHO05D007522 2.6e-13 80.1 211 27.0
Glyma.10G121700 Glycine max HOM05D000045 ORTHO05D000067 5.9e-13 79.0 236 28.4
TPR.G600 Trifolium pratense HOM05D000045 ORTHO05D007522 1.3e-12 77.8 95 41.1
TPR.G29715 Trifolium pratense HOM05D000045 ORTHO05D007522 1.7e-12 77.4 179 31.3
TPR.G36052 Trifolium pratense HOM05D000045 ORTHO05D007522 2.2e-12 77.0 191 30.9
TPR.G36375 Trifolium pratense HOM05D012399 ORTHO05D007522 2.9e-12 76.6 182 29.1
Glyma.18G179400 Glycine max HOM05D000045 ORTHO05D000067 3.8e-12 76.3 175 28.6
Medtr5g076070 Medicago truncatula HOM05D000045 ORTHO05D007522 5.0e-12 75.9 157 33.8
Medtr2g101460 Medicago truncatula HOM05D008512 ORTHO05D007522 1.1e-11 74.7 100 38.0
Medtr6g022080 Medicago truncatula HOM05D015175 ORTHO05D007522 1.9e-11 73.9 245 27.3
Lj1g0004807 Lotus japonicus HOM05D000045 ORTHO05D000067 2.5e-11 73.6 256 28.9
Medtr3g448650 Medicago truncatula HOM05D008512 ORTHO05D007522 3.2e-11 73.2 94 37.2
arahy.Tifrunner.gnm1.ann1.N9AV22 Arachis hypogaea HOM05D010283 ORTHO05D013006 5.5e-11 72.4 169 30.8
arahy.Tifrunner.gnm1.ann1.MU2UU0 Arachis hypogaea HOM05D010283 ORTHO05D013006 9.4e-11 71.6 187 28.9
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 1.6e-10 70.9 99 38.4
Lj1g0011931 Lotus japonicus HOM05D012399 ORTHO05D007522 4.7e-10 69.3 103 38.8
arahy.Tifrunner.gnm1.ann1.G6Y5VA Arachis hypogaea HOM05D000045 ORTHO05D000067 6.1e-10 68.9 164 28.0
TPR.G21949 Trifolium pratense HOM05D008512 ORTHO05D007522 6.1e-10 68.9 106 40.6
TPR.G25074 Trifolium pratense HOM05D012399 ORTHO05D007522 6.1e-10 68.9 88 40.9
Lj4g0021877 Lotus japonicus HOM05D000045 ORTHO05D000067 1.0e-09 68.2 231 26.4
arahy.Tifrunner.gnm1.ann1.8SNE72 Arachis hypogaea HOM05D000045 ORTHO05D007522 1.4e-09 67.8 224 26.3
Medtr1g052260 Medicago truncatula HOM05D008512 ORTHO05D007522 1.4e-09 67.8 98 37.8
arahy.Tifrunner.gnm1.ann1.VI37WY Arachis hypogaea HOM05D000045 ORTHO05D007522 2.3e-09 67.0 171 28.1
arahy.Tifrunner.gnm1.ann1.Z9H0PS Arachis hypogaea HOM05D000045 ORTHO05D000067 2.3e-09 67.0 171 28.7
LjContig00413g0001833 Lotus japonicus HOM05D014238 ORTHO05D015703 2.3e-09 67.0 156 30.8
Medtr0060s0090 Medicago truncatula HOM05D012399 ORTHO05D007522 6.7e-09 65.5 79 43.0
Glyma.13G000732 Glycine max HOM05D008512 ORTHO05D007522 7.4e-08 62.0 170 30.0
arahy.Tifrunner.gnm1.ann1.R9E33Q Arachis hypogaea HOM05D008512 ORTHO05D007522 1.7e-07 60.8 100 34.0
Atru.chr4.298 Acer truncatum HOM05D000045 ORTHO05D000067 2.8e-07 60.1 216 25.0
Glyma.06G229800 Glycine max HOM05D000045 ORTHO05D007522 2.8e-07 60.1 254 26.0
Glyma.12G011500 Glycine max HOM05D010283 ORTHO05D007522 6.3e-07 58.9 111 30.6
Medtr6g053140 Medicago truncatula HOM05D015175 ORTHO05D007522 6.3e-07 58.9 153 32.7
Lj2g0025478 Lotus japonicus HOM05D009753 ORTHO05D010597 8.2e-07 58.5 104 36.5
Prupe.1G223100 Prunus persica HOM05D000045 ORTHO05D000067 8.2e-07 58.5 67 49.3
Rhsim11G0186200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 58.2 179 27.9
arahy.Tifrunner.gnm1.ann1.Z72PVB Arachis hypogaea HOM05D008512 ORTHO05D007522 1.4e-06 57.8 124 31.5
Psat6g085800 Pisum sativum HOM05D021955 ORTHO05D007522 1.4e-06 57.8 112 33.0
CDE11G0520 Ceratophyllum demersum HOM05D000045 ORTHO05D001346 1.8e-06 57.4 101 35.6
Lj6g0018942 Lotus japonicus HOM05D000045 ORTHO05D000067 1.8e-06 57.4 177 26.6
LjContig00126g0012758 Lotus japonicus HOM05D000045 ORTHO05D000067 1.8e-06 57.4 177 26.6
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 1.8e-06 57.4 179 25.1
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.1e-06 56.6 155 29.7
FvH4_4g10122 Fragaria vesca HOM05D000045 ORTHO05D012261 3.1e-06 56.6 173 26.6
TPR.G40266 Trifolium pratense HOM05D000045 ORTHO05D007522 3.1e-06 56.6 112 31.2
TPR.G5153 Trifolium pratense HOM05D000045 ORTHO05D010597 3.1e-06 56.6 170 30.0
TPR.G9519 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-06 56.6 123 30.9
CANSAT78G1905 Cannabis sativa HOM05D000045 ORTHO05D001346 4.1e-06 56.2 101 35.6
Lj1g0005830 Lotus japonicus HOM05D000045 ORTHO05D003357 4.1e-06 56.2 168 25.6
Lj6g0006221 Lotus japonicus HOM05D000045 ORTHO05D001346 5.3e-06 55.8 103 36.9
Psat1g158280 Pisum sativum HOM05D000045 ORTHO05D001346 5.3e-06 55.8 102 36.3
COL.COLO4_12964 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.1e-06 55.1 155 29.0


User provided reference genes

Program Settings