Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0009165 Lotus japonicus HOM05D007861 ORTHO05D007271 1.2e-52 209.5 101 100.0
Glyma.20G182100 Glycine max HOM05D007861 ORTHO05D007271 3.7e-30 134.8 104 65.4
Glyma.10G208600 Glycine max HOM05D007861 ORTHO05D007271 2.5e-26 122.1 109 65.1
Phvul.007G098200 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 5.1e-24 114.4 104 65.4
Lalb_Chr02g0152111 Lupinus albus HOM05D007861 ORTHO05D007271 8.5e-19 97.1 99 52.5
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 1.1e-18 96.7 102 58.8
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 2.3e-16 89.0 100 55.0
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 8.8e-16 87.0 107 52.3
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 1.5e-10 69.7 88 47.7
CiPaw.02G172600 Carya illinoinensis HOM05D019773 ORTHO05D007271 1.9e-10 69.3 90 51.1
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 5.5e-10 67.8 99 43.4
Lsat_1_v5_gn_8_20640 Lactuca sativa HOM05D007861 ORTHO05D007271 7.2e-10 67.4 108 45.4
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 2.1e-09 65.9 104 42.3
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 6.1e-09 64.3 81 44.4
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 8.0e-09 63.9 91 44.0
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 8.0e-09 63.9 98 44.9
Haze_16853 Corylus avellana HOM05D009695 ORTHO05D007271 5.2e-08 61.2 95 42.1
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 6.7e-08 60.8 97 42.3
Manes.07G095300 Manihot esculenta HOM05D009695 ORTHO05D007271 1.5e-07 59.7 98 46.9
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 9.7e-07 57.0 99 42.4
CiPaw.01G269700 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.3e-06 56.6 81 44.4
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.7e-06 56.2 97 38.1
Prupe.2G209700 Prunus persica HOM05D019773 ORTHO05D007271 1.7e-06 56.2 109 39.4
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 3.7e-06 55.1 97 41.2
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 6.3e-06 54.3 58 55.2
Gorai.009G311600 Gossypium raimondii HOM05D009695 ORTHO05D007271 6.3e-06 54.3 97 40.2
Rhsim03G0116500 Rhododendron simsii HOM05D009695 ORTHO05D007271 6.3e-06 54.3 55 50.9


User provided reference genes

Program Settings