Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 5.6e-107 391.0 199 100.0
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 2.1e-69 266.2 200 70.5
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 3.6e-69 265.4 200 70.0
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 6.9e-65 251.1 201 67.7
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 9.1e-65 250.8 204 66.2
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 7.7e-64 247.7 199 66.3
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 1.2e-56 223.8 201 61.7
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 4.5e-56 221.9 190 65.3
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 6.5e-55 218.0 202 61.4
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 1.9e-54 216.5 191 61.8
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 2.5e-54 216.1 191 63.9
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 2.5e-54 216.1 191 63.9
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 9.4e-54 214.2 188 63.3
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 2.7e-53 212.6 202 57.4
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 3.3e-51 205.7 184 59.8
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 4.8e-50 201.8 202 55.9
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 4.8e-50 201.8 191 58.1
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 2.0e-48 196.4 168 64.3
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 3.3e-43 179.1 203 52.7
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 2.8e-42 176.0 184 55.4
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.2e-40 170.6 203 48.3
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 2.9e-39 166.0 185 53.0
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 6.8e-36 154.8 173 50.9
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 1.5e-35 153.7 186 49.5
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 4.4e-35 152.1 188 50.5
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.4e-33 147.1 183 45.4
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 2.4e-33 146.4 187 47.1
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 2.4e-33 146.4 170 48.8
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 4.1e-33 145.6 190 45.3
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 9.1e-33 144.4 173 49.7
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 7.7e-32 141.4 192 43.2
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 1.3e-31 140.6 172 50.0
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 5.0e-31 138.7 176 46.6
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 8.5e-31 137.9 168 50.0
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 2.1e-29 133.3 194 43.8
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 3.6e-29 132.5 184 46.2
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 2.0e-27 126.7 194 44.8
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 9.8e-27 124.4 185 43.8
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 1.7e-26 123.6 172 43.6
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 2.8e-26 122.9 189 41.3
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 4.5e-24 115.5 164 43.3
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 2.3e-23 113.2 165 43.0
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 4.3e-22 109.0 178 41.0
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 5.6e-22 108.6 160 42.5
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 1.2e-21 107.5 163 42.3
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 2.1e-21 106.7 98 58.2
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 2.8e-21 106.3 169 42.6
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 8.0e-21 104.8 169 42.6
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.4e-20 104.0 160 41.2
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 3.4e-19 99.4 178 36.5
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 2.4e-17 93.2 170 37.6
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 5.4e-17 92.0 79 57.0
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 2.0e-16 90.1 178 34.3
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 3.5e-16 89.4 135 47.4
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 7.8e-16 88.2 165 37.0
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 7.8e-16 88.2 170 35.3
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.5e-14 84.0 160 36.2
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 1.5e-14 84.0 162 37.7
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 3.3e-14 82.8 122 41.8
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 7.3e-14 81.6 162 35.8
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 3.7e-10 69.3 110 40.9
arahy.Tifrunner.gnm1.ann1.F86J4F Arachis hypogaea HOM05D005905 ORTHO05D005996 4.9e-10 68.9 60 53.3
EL10Ac2g02566 Beta vulgaris HOM05D007972 ORTHO05D010352 6.4e-10 68.6 92 42.4
CiPaw.03G258500 Carya illinoinensis HOM05D000490 ORTHO05D000785 2.5e-06 56.6 161 33.5
HPP92_025707 Vanilla planifolia HOM05D007972 ORTHO05D010352 7.3e-06 55.1 158 31.6


User provided reference genes

Program Settings