Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.3e-60 235.3 117 100.0
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 2.9e-47 191.8 111 82.9
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 9.4e-46 186.8 109 80.7
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.2e-45 186.4 113 82.3
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 6.1e-45 184.1 107 85.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.1e-45 184.1 106 80.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 6.1e-45 184.1 106 80.2
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.0e-45 183.7 112 79.5
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.0e-45 183.7 111 80.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 8.0e-45 183.7 111 81.1
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.0e-44 183.3 112 75.0
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.0e-44 183.3 110 77.3
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.4e-44 183.0 110 76.4
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.4e-44 183.0 104 85.6
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.8e-44 182.6 104 79.8
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.3e-44 182.2 110 76.4
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.3e-44 182.2 104 82.7
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.3e-44 182.2 111 79.3
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.0e-44 181.8 112 74.1
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 3.0e-44 181.8 111 79.3
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 3.0e-44 181.8 111 81.1
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.0e-44 181.8 111 81.1
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.0e-44 181.8 104 84.6
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 4.0e-44 181.4 110 79.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.0e-44 181.4 106 79.2
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 5.2e-44 181.0 111 76.6
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 5.2e-44 181.0 112 74.1
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 6.8e-44 180.6 107 84.1
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 6.8e-44 180.6 104 83.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 6.8e-44 180.6 112 75.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 8.8e-44 180.3 111 79.3
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 8.8e-44 180.3 104 83.7
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 8.8e-44 180.3 104 78.8
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 8.8e-44 180.3 104 82.7
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 8.8e-44 180.3 110 78.2
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.2e-43 179.9 109 78.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.2e-43 179.9 105 82.9
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 1.5e-43 179.5 101 84.2
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.0e-43 179.1 110 80.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.0e-43 179.1 104 82.7
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 2.6e-43 178.7 105 79.0
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.6e-43 178.7 105 81.0
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.4e-43 178.3 104 79.8
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.4e-43 178.3 106 78.3
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 4.4e-43 177.9 102 83.3
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 4.4e-43 177.9 110 74.5
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 5.7e-43 177.6 112 79.5
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 7.5e-43 177.2 112 76.8
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.3e-42 176.4 112 78.6
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.3e-42 176.4 109 77.1
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.7e-42 176.0 109 77.1
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.7e-42 176.0 104 77.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.7e-42 176.0 113 73.5
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.2e-42 175.6 113 73.5
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 2.2e-42 175.6 114 71.9
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.8e-42 175.3 112 78.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.8e-42 175.3 99 79.8
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 4.8e-42 174.5 115 72.2
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 6.3e-42 174.1 102 81.4
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 6.3e-42 174.1 115 71.3
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 8.3e-42 173.7 111 77.5
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.4e-41 172.9 103 79.6
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.8e-41 172.6 113 76.1
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.8e-41 172.6 113 76.1
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.8e-41 172.6 113 76.1
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.8e-41 172.6 112 70.5
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 3.1e-41 171.8 99 83.8
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.1e-41 171.8 118 70.3
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.1e-41 171.8 132 67.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.1e-41 171.4 113 71.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 4.1e-41 171.4 113 71.7
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 5.4e-41 171.0 101 77.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 7.0e-41 170.6 99 78.8
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 9.1e-41 170.2 124 70.2
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.2e-40 169.9 106 72.6
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.6e-40 169.5 104 76.0
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 1.6e-40 169.5 98 78.6
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 2.7e-40 168.7 102 79.4
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.7e-40 168.7 112 70.5
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 7.7e-40 167.2 109 75.2
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.0e-39 166.8 101 77.2
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 1.0e-39 166.8 101 79.2
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.7e-39 166.0 108 75.9
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.3e-39 165.6 100 79.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 3.8e-39 164.9 112 71.4
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.0e-39 164.5 101 77.2
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-38 162.9 114 66.7
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.9e-38 162.5 101 73.3
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 2.5e-38 162.2 106 71.7
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.3e-38 161.8 101 73.3
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 4.2e-38 161.4 105 71.4
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.5e-38 161.0 103 74.8
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 9.5e-38 160.2 102 72.5
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 8.0e-37 157.1 106 67.0
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.3e-36 155.6 94 75.5
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 3.0e-36 155.2 127 61.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 6.8e-36 154.1 178 50.0
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 4.4e-35 151.4 126 60.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 2.2e-34 149.1 144 52.1
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 4.9e-34 147.9 90 80.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 4.9e-34 147.9 82 89.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.3e-34 147.5 103 68.9
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.1e-33 146.7 89 80.9
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.8e-33 146.0 91 79.1
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.4e-33 144.4 140 55.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 3.6e-29 131.7 100 65.0
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.0e-27 125.9 105 56.2
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 7.5e-27 124.0 75 76.0
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.3e-26 123.2 72 81.9
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 6.4e-26 120.9 97 61.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.2e-25 118.6 82 70.7
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 5.4e-25 117.9 63 88.9
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.0e-23 112.1 106 54.7
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.1e-22 110.2 64 79.7
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.3e-20 102.4 63 73.0
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.6e-19 99.0 54 85.2
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.7e-18 96.3 104 46.2
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 2.2e-18 95.9 85 54.1
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 2.4e-17 92.4 103 45.6
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 2.1e-16 89.4 63 69.8
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.7e-16 89.0 89 53.9
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.3e-15 85.9 98 38.8
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.6e-14 81.3 57 68.4
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 3.6e-13 78.6 90 36.7
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.1e-12 75.5 42 78.6
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 5.6e-06 54.7 74 44.6
Medtr1g094845 Medicago truncatula HOM05D006193 ORTHO05D007808 9.5e-06 53.9 42 66.7


User provided reference genes

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