Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007798 Lotus japonicus HOM05D000051 ORTHO05D000015 3.9e-90 334.7 162 100.0
QL01p041755 Quercus lobata HOM05D000051 ORTHO05D000015 1.8e-31 139.8 161 46.0
QL01p041777 Quercus lobata HOM05D000051 ORTHO05D000015 7.7e-30 134.4 161 45.3
Glyma.20G142600 Glycine max HOM05D000051 ORTHO05D000015 8.8e-26 120.9 96 62.5
QL05p074545 Quercus lobata HOM05D000051 ORTHO05D000015 3.2e-20 102.4 162 34.6
Cfa000258 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.6e-19 100.1 172 35.5
Cfa000229 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.4e-18 97.1 159 36.5
Cfa006569 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.0e-18 95.9 158 34.8
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 2.0e-17 93.2 142 40.1
Cfa000227 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.4e-17 92.4 161 34.2
COL.COLO4_04295 Corchorus olitorius HOM05D000051 ORTHO05D000015 4.4e-17 92.0 160 33.8
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 1.3e-16 90.5 155 37.4
QL05p074600 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-16 90.5 161 34.8
COL.COLO4_05307 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.7e-16 90.1 161 36.0
Cfa000228 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.2e-16 89.7 142 40.1
QL05p074475 Quercus lobata HOM05D000051 ORTHO05D000015 2.2e-16 89.7 161 32.3
Cfa000256 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.8e-16 89.4 160 36.2
QL01p041880 Quercus lobata HOM05D000051 ORTHO05D000015 4.8e-16 88.6 152 35.5
QL05p074592 Quercus lobata HOM05D000051 ORTHO05D000015 8.3e-16 87.8 166 34.9
COL.COLO4_35136 Corchorus olitorius HOM05D000051 ORTHO05D000015 5.4e-15 85.1 161 35.4
QL05p074559 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-14 84.0 134 36.6
Prupe.4G024600 Prunus persica HOM05D000051 ORTHO05D000015 1.6e-14 83.6 161 35.4
RcHm_v2.0_Chr5g0069781 Rosa chinensis HOM05D000051 ORTHO05D000015 1.6e-14 83.6 165 32.7
COL.COLO4_25166 Corchorus olitorius HOM05D000051 ORTHO05D000015 2.0e-14 83.2 159 33.3
Cfa006563 Carpinus fangiana HOM05D000051 ORTHO05D000015 4.5e-14 82.0 162 32.7
TWI38G2283 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 4.5e-14 82.0 120 39.2
Duzib160G0642 Durio zibethinus HOM05D000051 ORTHO05D000015 7.7e-14 81.3 160 33.8
QL05p074484 Quercus lobata HOM05D000051 ORTHO05D000015 7.7e-14 81.3 148 32.4
QL01p041788 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-13 80.5 162 34.6
PSO063G4990 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-13 79.7 158 31.0
Cfa016050 Carpinus fangiana HOM05D000051 ORTHO05D000015 6.5e-13 78.2 115 39.1
Eucgr.E04101 Eucalyptus grandis HOM05D000051 ORTHO05D000015 6.5e-13 78.2 159 34.6
QL01p041783 Quercus lobata HOM05D000051 ORTHO05D000015 6.5e-13 78.2 162 34.0
Rhsim04G0001300 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.5e-13 78.2 110 37.3
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 1.5e-12 77.0 165 30.9
QL05p074566 Quercus lobata HOM05D000051 ORTHO05D000015 1.5e-12 77.0 163 32.5
RcHm_v2.0_Chr5g0069761 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-12 77.0 163 28.2
Cfa000226 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.5e-12 76.3 158 32.3
COL.COLO4_04293 Corchorus olitorius HOM05D000051 ORTHO05D000015 3.2e-12 75.9 86 45.3
RcHm_v2.0_Chr5g0069821 Rosa chinensis HOM05D000051 ORTHO05D000015 3.2e-12 75.9 160 30.6
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 7.2e-12 74.7 119 38.7
VMungo1215G1023 Vigna mungo HOM05D000051 ORTHO05D000015 7.2e-12 74.7 164 30.5
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 1.2e-11 73.9 152 30.9
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 1.2e-11 73.9 160 29.4
Psat4g211000 Pisum sativum HOM05D000051 ORTHO05D000015 3.6e-11 72.4 160 29.4
Potri.011G024600 Populus trichocarpa HOM05D000051 ORTHO05D000015 6.1e-11 71.6 153 34.6
TWI38G0777 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 6.1e-11 71.6 161 33.5
Cfa000257 Carpinus fangiana HOM05D000051 ORTHO05D000015 8.0e-11 71.2 155 32.9
Duzib213G0754 Durio zibethinus HOM05D000051 ORTHO05D000015 8.0e-11 71.2 97 37.1
TWI38G2112 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.0e-11 71.2 154 33.8
vmacro09739 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.4e-10 70.5 85 38.8
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 1.8e-10 70.1 155 30.3
arahy.Tifrunner.gnm1.ann1.U3PQ4N Arachis hypogaea HOM05D000051 ORTHO05D000015 2.3e-10 69.7 119 32.8
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 2.3e-10 69.7 136 30.9
QL01p041814 Quercus lobata HOM05D000051 ORTHO05D000015 3.0e-10 69.3 126 31.7
Medtr5g005690 Medicago truncatula HOM05D000051 ORTHO05D000015 5.2e-10 68.6 157 29.9
TWI63G1267 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 5.2e-10 68.6 128 35.2
arahy.Tifrunner.gnm1.ann1.LZ56CD Arachis hypogaea HOM05D000051 ORTHO05D000015 6.8e-10 68.2 112 33.9
QL01p041826 Quercus lobata HOM05D000051 ORTHO05D000015 6.8e-10 68.2 159 32.7
Eucgr.E04098 Eucalyptus grandis HOM05D000051 ORTHO05D000015 1.2e-09 67.4 162 30.9
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.0e-09 66.6 116 36.2
Rhsim04G0000300 Rhododendron simsii HOM05D000051 ORTHO05D000015 2.0e-09 66.6 85 37.6
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 2.6e-09 66.2 114 31.6
COL.COLO4_37447 Corchorus olitorius HOM05D000051 ORTHO05D000015 9.8e-09 64.3 111 35.1
CSS0034448 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.3e-08 63.9 85 42.4
Medtr4g080590 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-08 63.9 124 34.7
CSS0016803 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.7e-08 63.5 158 33.5
DCAR_024431 Daucus carota HOM05D000051 ORTHO05D000015 1.7e-08 63.5 114 34.2
QL05p025638 Quercus lobata HOM05D000051 ORTHO05D000015 1.7e-08 63.5 113 38.9
arahy.Tifrunner.gnm1.ann1.T6X0Y4 Arachis hypogaea HOM05D000051 ORTHO05D000015 2.2e-08 63.2 127 29.1
Cfa007373 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.2e-08 63.2 112 37.5
PSO210G0755 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-08 63.2 111 35.1
Rhsim04G0037500 Rhododendron simsii HOM05D000051 ORTHO05D000015 2.8e-08 62.8 126 34.1
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 3.7e-08 62.4 114 33.3
PSO210G5140 Papaver somniferum HOM05D000051 ORTHO05D000015 3.7e-08 62.4 127 37.8
AUR62033355 Chenopodium quinoa HOM05D000051 ORTHO05D000015 4.9e-08 62.0 117 39.3
AUR62033357 Chenopodium quinoa HOM05D000051 ORTHO05D000015 4.9e-08 62.0 117 39.3
PSO210G6785 Papaver somniferum HOM05D000051 ORTHO05D000015 4.9e-08 62.0 127 35.4
RhsimUnG0013000 Rhododendron simsii HOM05D022656 ORTHO05D022449 4.9e-08 62.0 126 33.3
vmacro11759 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 4.9e-08 62.0 141 34.0
FAN10G3451 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.3e-08 61.6 123 32.5
MD11G1274900 Malus domestica HOM05D000051 ORTHO05D000015 6.3e-08 61.6 125 32.8
Cc09_g09330 Coffea canephora HOM05D000051 ORTHO05D000015 8.3e-08 61.2 161 29.8
SGA_v2.0_scaffold70G23547 Striga asiatica HOM05D000051 ORTHO05D000015 8.3e-08 61.2 114 35.1
QL05p074536 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-07 60.8 162 27.8
DCAR_004437 Daucus carota HOM05D000051 ORTHO05D000015 1.4e-07 60.5 114 32.5
Hund23290 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-07 60.5 162 29.0
Ah.04g165630 Amaranthus hybridus HOM05D000051 ORTHO05D000015 1.8e-07 60.1 119 36.1
QL08p019859 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-07 59.7 174 29.9
AUR62033353 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.1e-07 59.3 117 38.5
Migut.M00840 Erythranthe guttata HOM05D000051 ORTHO05D000015 4.1e-07 58.9 116 33.6
Aqoxy1G03334 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.4e-07 58.5 100 33.0
Sc13g0005440 Simmondsia chinensis HOM05D000051 ORTHO05D000015 5.4e-07 58.5 118 32.2
Phvul.002G047900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 7.0e-07 58.2 167 29.9
PGR042G0007 Punica granatum HOM05D000051 ORTHO05D000015 7.0e-07 58.2 123 28.5
CSS0042786 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 9.2e-07 57.8 123 30.9
Rhsim04G0020200 Rhododendron simsii HOM05D000051 ORTHO05D000015 9.2e-07 57.8 118 34.7
RhsimUnG0031600 Rhododendron simsii HOM05D000051 ORTHO05D000015 9.2e-07 57.8 118 34.7
PSO832G0984 Papaver somniferum HOM05D000051 ORTHO05D000015 1.2e-06 57.4 109 30.3
arahy.Tifrunner.gnm1.ann1.3J0CNY Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-06 57.0 166 24.7
arahy.Tifrunner.gnm1.ann1.9X7FSY Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-06 57.0 122 27.9
AUR62031930 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.6e-06 57.0 172 30.2
Lj5g0023504 Lotus japonicus HOM05D000051 ORTHO05D000015 2.0e-06 56.6 171 26.3
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 2.0e-06 56.6 85 32.9
PGR042G0305 Punica granatum HOM05D000051 ORTHO05D000015 2.0e-06 56.6 160 29.4
RcHm_v2.0_Chr1g0363171 Rosa chinensis HOM05D000051 ORTHO05D000015 2.0e-06 56.6 116 36.2
RcHm_v2.0_Chr5g0003811 Rosa chinensis HOM05D000051 ORTHO05D000015 2.0e-06 56.6 104 35.6
Duzib114G0289 Durio zibethinus HOM05D000051 ORTHO05D000015 2.7e-06 56.2 114 28.9
Eucgr.E04094 Eucalyptus grandis HOM05D000051 ORTHO05D000015 2.7e-06 56.2 158 27.8
Nitab4.5_0000397g0270 Nicotiana tabacum HOM05D000051 ORTHO05D000015 2.7e-06 56.2 85 32.9
TPR.G17469 Trifolium pratense HOM05D000051 ORTHO05D000015 2.7e-06 56.2 113 30.1
FAN10G1889 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.5e-06 55.5 78 37.2
Lj6g0014399 Lotus japonicus HOM05D000051 ORTHO05D000015 4.5e-06 55.5 110 33.6
Cfa010713 Carpinus fangiana HOM05D000051 ORTHO05D000015 5.9e-06 55.1 124 33.9
CSS0008598 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 7.7e-06 54.7 112 37.5
Sc16g0006160 Simmondsia chinensis HOM05D000051 ORTHO05D000015 7.7e-06 54.7 96 33.3
TPR.G7610 Trifolium pratense HOM05D000051 ORTHO05D000015 7.7e-06 54.7 165 25.5


User provided reference genes

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