Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 2.3e-95 352.4 211 100.0
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 1.1e-36 157.5 226 46.9
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 5.5e-36 155.2 221 47.1
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 6.1e-35 151.8 187 55.6
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 3.9e-34 149.1 212 46.7
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 8.8e-34 147.9 177 51.4
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 6.3e-32 141.7 211 46.4
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 2.9e-29 132.9 257 47.9
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 3.2e-28 129.4 193 45.1
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 3.6e-27 125.9 244 40.2
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 6.1e-27 125.2 201 54.7
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 1.8e-26 123.6 208 43.3
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 3.0e-26 122.9 248 41.1
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 8.8e-26 121.3 222 41.0
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 3.3e-25 119.4 237 39.7
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.3e-24 117.5 217 40.1
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 8.2e-24 114.8 202 39.6
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 1.4e-23 114.0 171 49.1
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 3.1e-23 112.8 206 39.3
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 2.2e-21 106.7 231 39.0
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 1.1e-17 94.4 194 43.3
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 1.3e-16 90.9 205 38.0
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 3.7e-16 89.4 202 39.1
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 2.4e-15 86.7 159 39.6
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 9.1e-15 84.7 197 34.5
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 1.3e-13 80.9 203 35.5
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 2.9e-13 79.7 185 34.6
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 3.8e-13 79.3 167 35.3
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 8.5e-13 78.2 200 32.5
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 8.5e-13 78.2 177 36.2
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 8.5e-13 78.2 179 34.6
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.5e-12 77.4 202 36.1
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 2.5e-12 76.6 207 32.4
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 2.5e-12 76.6 169 34.9
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 4.2e-12 75.9 182 33.5
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 7.2e-12 75.1 119 41.2
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 9.4e-12 74.7 145 39.3
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 9.4e-12 74.7 215 37.7
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 9.4e-12 74.7 175 34.3
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 1.2e-11 74.3 213 35.2
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 1.2e-11 74.3 173 34.7
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 2.1e-11 73.6 202 30.7
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 2.1e-11 73.6 188 35.6
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.1e-11 73.6 172 35.5
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 2.1e-11 73.6 198 35.9
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 2.1e-11 73.6 143 41.3
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 2.1e-11 73.6 143 42.0
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 2.7e-11 73.2 172 34.9
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.6e-11 72.8 204 32.8
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 4.7e-11 72.4 172 34.9
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 6.1e-11 72.0 201 32.8
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 1.8e-10 70.5 203 31.0
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.8e-10 70.5 160 38.1
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 2.3e-10 70.1 181 30.4
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 2.3e-10 70.1 211 30.3
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 2.3e-10 70.1 160 36.9
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 4.0e-10 69.3 190 31.1
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 6.8e-10 68.6 201 32.3
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 6.8e-10 68.6 143 41.3
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 8.8e-10 68.2 216 29.6
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 1.5e-09 67.4 202 31.2
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 2.6e-09 66.6 209 35.4
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 3.4e-09 66.2 215 31.6
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 3.4e-09 66.2 185 30.3
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 4.4e-09 65.9 169 35.5
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.7e-09 65.5 144 34.7
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 7.5e-09 65.1 141 36.2
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 9.8e-09 64.7 40 75.0
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 1.7e-08 63.9 213 30.5
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.8e-07 60.5 215 31.2
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 1.8e-07 60.5 163 33.7
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 2.4e-07 60.1 174 36.8
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 3.1e-07 59.7 197 37.1
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 4.1e-07 59.3 40 62.5
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 5.4e-07 58.9 168 31.5
Gorai.008G141500 Gossypium raimondii HOM05D041120 ORTHO05D009051 7.0e-07 58.5 186 30.6
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 7.0e-07 58.5 222 34.7
Gohir.A12G126800 Gossypium hirsutum HOM05D041120 ORTHO05D009051 1.2e-06 57.8 185 30.8
Gohir.D12G130200 Gossypium hirsutum HOM05D041120 ORTHO05D009051 1.2e-06 57.8 186 31.2
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.2e-06 57.8 192 32.3
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 1.6e-06 57.4 206 27.7
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 2.0e-06 57.0 201 28.4
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 2.7e-06 56.6 194 29.4
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 7.7e-06 55.1 183 34.4
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 7.7e-06 55.1 177 36.7


User provided reference genes

Program Settings