Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007613 Lotus japonicus HOM05D010135 ORTHO05D011377 2.6e-46 188.3 94 100.0
Lalb_Chr21g0310111 Lupinus albus HOM05D010135 ORTHO05D011377 2.1e-27 125.6 94 71.3
Phvul.007G204200 Phaseolus vulgaris HOM05D010135 ORTHO05D011377 1.1e-23 113.2 102 63.7
Glyma.20G093300 Glycine max HOM05D010135 ORTHO05D011377 5.3e-23 110.9 102 66.7
Glyma.10G144400 Glycine max HOM05D010135 ORTHO05D011377 4.9e-21 104.4 102 63.7
VMungo0720G3097 Vigna mungo HOM05D001037 ORTHO05D011377 4.9e-21 104.4 89 65.2
QL03p009441 Quercus lobata HOM05D010135 ORTHO05D011377 8.7e-18 93.6 96 60.4
QL93p2005_0018 Quercus lobata HOM05D010135 ORTHO05D011377 8.7e-18 93.6 96 60.4
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 6.9e-15 84.0 107 52.3
MD12G1201300 Malus domestica HOM05D010135 ORTHO05D011377 7.7e-14 80.5 93 53.8
Prupe.6G306400 Prunus persica HOM05D010135 ORTHO05D011377 7.7e-14 80.5 89 53.9
Potri.013G004300 Populus trichocarpa HOM05D010135 ORTHO05D011377 7.2e-12 73.9 92 52.2
Sabra13G0003500 Salix brachista HOM05D010135 ORTHO05D011377 7.2e-12 73.9 92 51.1
Psat6g155320 Pisum sativum HOM05D029395 ORTHO05D011377 1.0e-10 70.1 94 53.2
Haze_04005 Corylus avellana HOM05D010135 ORTHO05D011377 1.8e-10 69.3 110 46.4
Potri.005G004800 Populus trichocarpa HOM05D010135 ORTHO05D011377 2.3e-10 68.9 92 51.1
RcHm_v2.0_Chr3g0458221 Rosa chinensis HOM05D008705 ORTHO05D011377 2.3e-10 68.9 81 54.3
Thecc.05G328000 Theobroma cacao HOM05D010135 ORTHO05D011377 3.9e-10 68.2 88 55.7
Sabra05G0001400 Salix brachista HOM05D010135 ORTHO05D011377 5.1e-10 67.8 92 51.1
Sabra05G0015500 Salix brachista HOM05D010135 ORTHO05D011377 5.1e-10 67.8 92 51.1
Dinv24500 Davidia involucrata HOM05D001037 ORTHO05D000888 8.8e-10 67.0 85 51.8
Medtr1g084780 Medicago truncatula HOM05D029395 ORTHO05D011377 8.8e-10 67.0 89 48.3
TPR.G2617 Trifolium pratense HOM05D029395 ORTHO05D011377 2.5e-09 65.5 92 53.3
FvH4_6g08340 Fragaria vesca HOM05D008705 ORTHO05D011377 4.3e-09 64.7 93 49.5
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.3e-09 64.7 81 53.1
FAN14G0920 Fragaria x ananassa HOM05D008705 ORTHO05D011377 4.3e-09 64.7 93 49.5
Ca_10192_v3 Cicer arietinum L. HOM05D029395 ORTHO05D011377 1.3e-08 63.2 97 48.5
Aqoxy2G02560 Aquilegia oxysepala HOM05D010135 ORTHO05D011377 2.2e-08 62.4 84 47.6
Gohir.A13G177500 Gossypium hirsutum HOM05D010135 ORTHO05D011377 7.7e-06 53.9 88 47.7
Gohir.D13G184100 Gossypium hirsutum HOM05D010135 ORTHO05D011377 7.7e-06 53.9 88 47.7
Gorai.013G209400 Gossypium raimondii HOM05D010135 ORTHO05D011377 7.7e-06 53.9 88 47.7


User provided reference genes

Program Settings