Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 0.0e+00 1457.2 715 100.0
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-233 813.5 816 55.5
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-233 813.5 816 55.5
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-232 810.1 816 55.4
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 4.6e-135 486.1 423 61.2
Lj6g0018929 Lotus japonicus HOM05D007728 ORTHO05D009681 9.4e-88 328.9 481 43.0
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-68 263.8 361 40.2
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 8.6e-49 199.5 319 33.9
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-48 198.7 363 33.1
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 7.3e-48 196.4 363 36.9
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-38 165.6 346 29.2
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 3.4e-37 161.0 273 30.8
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-35 156.0 706 22.8
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 3.9e-33 147.5 245 33.1
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 2.8e-31 141.4 171 37.4
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 3.6e-31 141.0 170 38.8
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-30 137.9 761 21.3
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 8.9e-30 136.3 429 25.6
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-29 136.0 217 33.6
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 4.4e-29 134.0 332 27.1
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 7.6e-29 133.3 662 24.2
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-28 132.5 197 34.0
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-28 132.5 176 36.9
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 2.2e-28 131.7 168 36.9
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-27 129.4 170 38.2
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 9.2e-27 126.3 273 27.1
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 9.2e-27 126.3 218 29.8
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 1.3e-25 122.5 211 33.2
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 1.3e-25 122.5 211 33.2
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 3.0e-25 121.3 231 31.2
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 6.6e-25 120.2 148 37.2
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-24 119.0 258 28.3
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 4.3e-24 117.5 165 35.2
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 4.3e-24 117.5 182 36.8
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 2.1e-23 115.2 191 31.9
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 2.8e-23 114.8 191 31.4
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 2.8e-23 114.8 164 34.8
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-22 112.8 137 35.8
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 1.4e-22 112.5 152 32.2
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 1.8e-22 112.1 164 32.9
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 1.2e-21 109.4 177 29.4
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 2.0e-21 108.6 162 37.0
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 7.6e-21 106.7 330 25.5
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 1.3e-20 105.9 162 33.3
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-20 105.9 163 33.1
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 1.7e-20 105.5 164 32.9
Lj6g0017717 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-20 105.5 101 59.4
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 7.1e-19 100.1 294 24.8
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 9.3e-19 99.8 161 32.3
Lj3g0006262 Lotus japonicus HOM05D007728 ORTHO05D009681 2.7e-18 98.2 181 32.6
Lj2g0011761 Lotus japonicus HOM05D007728 ORTHO05D009681 4.6e-18 97.4 164 32.3
arahy.Tifrunner.gnm1.ann1.E3DKLZ Arachis hypogaea HOM05D009036 ORTHO05D011872 1.3e-17 95.9 224 31.2
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 1.7e-17 95.5 239 29.7
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-17 95.1 174 33.3
Lj4g0011622 Lotus japonicus HOM05D016573 ORTHO05D009681 1.9e-16 92.0 122 33.6
arahy.Tifrunner.gnm1.ann1.2QX347 Arachis hypogaea HOM05D009036 ORTHO05D011872 9.6e-16 89.7 188 27.7
arahy.Tifrunner.gnm1.ann1.LCEB5E Arachis hypogaea HOM05D009036 ORTHO05D011872 1.3e-15 89.4 188 27.7
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-15 89.4 149 30.9
arahy.Tifrunner.gnm1.ann1.S3PUKV Arachis hypogaea HOM05D009036 ORTHO05D011872 4.8e-15 87.4 142 33.1
TPR.G27876 Trifolium pratense HOM05D061328 ORTHO05D022933 6.2e-15 87.0 260 26.9
arahy.Tifrunner.gnm1.ann1.K1ZRFD Arachis hypogaea HOM05D009036 ORTHO05D011872 1.1e-14 86.3 163 28.8
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 1.4e-14 85.9 215 28.4
Lj5g0016739 Lotus japonicus HOM05D024850 ORTHO05D025768 1.4e-14 85.9 389 23.1
arahy.Tifrunner.gnm1.ann1.MRZ5LS Arachis hypogaea HOM05D007728 ORTHO05D009681 2.4e-14 85.1 131 31.3
arahy.Tifrunner.gnm1.ann1.7H371A Arachis hypogaea HOM05D009036 ORTHO05D011872 4.0e-14 84.3 170 30.0
Lj1g0006672 Lotus japonicus HOM05D007728 ORTHO05D009681 9.0e-14 83.2 127 36.2
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 9.0e-14 83.2 229 26.6
arahy.Tifrunner.gnm1.ann1.N9YQYJ Arachis hypogaea HOM05D008645 ORTHO05D007788 4.5e-13 80.9 157 32.5
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 7.6e-13 80.1 197 26.4
Lj2g0004234 Lotus japonicus HOM05D007728 ORTHO05D237077 7.6e-13 80.1 119 37.0
arahy.Tifrunner.gnm1.ann1.TLC2KB Arachis hypogaea HOM05D009036 ORTHO05D011872 9.9e-13 79.7 138 26.1
Medtr6g061910 Medicago truncatula HOM05D035021 ORTHO05D022933 1.7e-12 79.0 203 29.1
arahy.Tifrunner.gnm1.ann1.7CZB22 Arachis hypogaea HOM05D009036 ORTHO05D011872 3.8e-12 77.8 161 26.7
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 4.9e-12 77.4 140 32.9
arahy.Tifrunner.gnm1.ann1.6QZ6Z8 Arachis hypogaea HOM05D014551 ORTHO05D009681 1.1e-11 76.3 218 22.5
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 1.4e-11 75.9 162 29.0
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-11 75.9 152 28.9
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 1.9e-11 75.5 162 27.8
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 1.9e-11 75.5 162 27.8
Lj1g0004024 Lotus japonicus HOM05D007728 ORTHO05D011037 2.4e-11 75.1 130 36.2
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 3.2e-11 74.7 162 27.8
arahy.Tifrunner.gnm1.ann1.M4BVAC Arachis hypogaea HOM05D057451 ORTHO05D009681 5.4e-11 73.9 175 26.3
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 9.3e-11 73.2 185 29.2
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 9.3e-11 73.2 194 28.4
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 1.2e-10 72.8 154 27.9
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 1.6e-10 72.4 162 27.8
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 2.7e-10 71.6 162 27.2
Medtr6g035170 Medicago truncatula HOM05D009725 ORTHO05D007788 6.0e-10 70.5 156 28.2
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 7.9e-10 70.1 277 24.9
Medtr8g028665 Medicago truncatula HOM05D007728 ORTHO05D010784 1.0e-09 69.7 83 37.3
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-09 69.3 76 40.8
Lj4g0026673 Lotus japonicus HOM05D011457 ORTHO05D007788 5.1e-09 67.4 170 27.1
Lj4g0005981 Lotus japonicus HOM05D007728 ORTHO05D009681 8.7e-09 66.6 500 22.8
TPR.G39857 Trifolium pratense HOM05D016378 ORTHO05D019219 1.1e-08 66.2 113 25.7
arahy.Tifrunner.gnm1.ann1.YV18TB Arachis hypogaea HOM05D008645 ORTHO05D007788 1.5e-08 65.9 210 25.7
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 1.6e-07 62.4 156 26.9
Lj4g0012974 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-07 61.2 235 24.7
Lj5g0015857 Lotus japonicus HOM05D009725 ORTHO05D007788 6.2e-07 60.5 163 24.5
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 8.1e-07 60.1 210 23.3
TPR.G39856 Trifolium pratense HOM05D007728 ORTHO05D025857 1.1e-06 59.7 123 27.6
Medtr8g031240 Medicago truncatula HOM05D009725 ORTHO05D007788 1.4e-06 59.3 146 27.4
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 1.4e-06 59.3 166 22.9
arahy.Tifrunner.gnm1.ann1.X09WXA Arachis hypogaea HOM05D012495 ORTHO05D013764 1.8e-06 58.9 148 30.4
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 2.4e-06 58.5 163 23.9
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 2.4e-06 58.5 140 27.9
arahy.Tifrunner.gnm1.ann1.IZD333 Arachis hypogaea HOM05D008645 ORTHO05D007788 4.0e-06 57.8 265 23.4
arahy.Tifrunner.gnm1.ann1.2N7Z0C Arachis hypogaea HOM05D008645 ORTHO05D007788 6.9e-06 57.0 268 24.3
Lj5g0003789 Lotus japonicus HOM05D007728 ORTHO05D009681 6.9e-06 57.0 215 22.8


User provided reference genes

Program Settings