Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.9e-238 828.2 417 100.0
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.3e-201 706.4 413 83.8
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.0e-198 696.8 413 84.5
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 8.5e-198 693.7 408 84.8
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.1e-197 693.3 406 85.0
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 1.4e-197 693.0 414 82.6
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.5e-197 692.2 414 82.4
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 9.4e-197 690.3 411 82.2
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.0e-195 685.3 413 84.3
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.8e-192 676.0 413 83.3
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.7e-177 626.3 407 76.7
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.5e-173 613.2 414 73.9
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 3.2e-173 612.1 414 74.2
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 3.0e-171 605.5 414 72.9
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 3.0e-171 605.5 402 73.9
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 6.8e-171 604.4 414 72.9
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.2e-170 603.6 421 72.7
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 2.6e-170 602.4 415 73.0
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.3e-169 600.1 404 73.5
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 4.8e-169 598.2 404 73.0
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 4.8e-169 598.2 436 70.2
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 7.0e-168 594.3 416 69.2
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.2e-167 593.6 416 72.1
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 2.0e-167 592.8 413 72.4
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.7e-167 592.4 396 73.5
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 3.5e-167 592.0 413 71.4
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.7e-166 589.7 406 73.2
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.1e-165 587.0 421 70.8
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.5e-165 586.6 414 71.5
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.5e-165 586.6 417 71.9
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.2e-165 585.5 414 71.3
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.2e-165 585.5 414 71.5
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 4.7e-164 581.6 462 66.0
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 6.1e-164 581.3 413 70.7
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 4.0e-163 578.6 414 70.3
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 2.0e-162 576.2 406 70.2
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 4.4e-162 575.1 402 70.6
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 2.2e-161 572.8 408 71.1
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.4e-160 569.3 406 68.2
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.4e-160 569.3 395 71.6
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 5.4e-160 568.2 404 70.0
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 5.4e-160 568.2 414 67.9
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 5.4e-160 568.2 414 68.1
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 7.0e-160 567.8 406 69.7
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 7.0e-160 567.8 402 69.7
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 1.2e-159 567.0 402 69.4
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.0e-159 566.2 402 69.4
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 2.7e-159 565.8 414 67.4
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.3e-158 563.5 416 67.3
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.7e-158 563.1 412 68.7
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 8.6e-158 560.8 450 64.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 8.6e-158 560.8 406 69.7
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.1e-157 560.5 406 69.7
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.5e-157 560.1 414 67.1
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.9e-157 559.7 420 66.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 3.3e-157 558.9 406 69.2
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.3e-157 557.8 408 69.4
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 7.3e-157 557.8 414 67.9
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.8e-156 555.8 402 68.2
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.8e-156 555.8 411 68.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 3.6e-156 555.4 402 68.2
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 8.0e-156 554.3 443 63.9
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 8.0e-156 554.3 408 66.9
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.0e-156 554.3 457 64.1
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.5e-154 550.1 443 63.2
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.0e-154 549.7 407 66.6
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 2.6e-154 549.3 443 63.2
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 7.5e-154 547.7 414 67.6
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 8.3e-153 544.3 396 68.7
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 2.4e-152 542.7 455 62.4
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 3.2e-152 542.3 403 67.7
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.3e-150 537.0 407 66.8
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 6.2e-148 528.1 407 65.8
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 8.0e-148 527.7 461 59.7
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.0e-146 523.1 414 64.3
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 5.8e-146 521.5 379 70.7
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.4e-145 518.1 444 62.2
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.4e-144 516.9 332 76.8
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.0e-142 510.8 441 60.5
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 8.6e-142 507.7 411 64.7
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.5e-141 506.9 419 61.3
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 9.5e-141 504.2 441 60.3
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 9.5e-141 504.2 411 64.2
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.7e-140 501.9 437 62.7
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 8.1e-140 501.1 400 65.0
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.1e-139 499.2 403 64.5
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 8.3e-137 491.1 472 56.8
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.1e-136 490.7 406 59.6
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 3.5e-135 485.7 403 60.5
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.3e-134 483.8 402 61.2
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.9e-134 482.3 413 61.7
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.2e-132 477.2 360 66.7
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 2.1e-132 476.5 447 55.0
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.8e-132 476.1 340 70.6
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.6e-127 460.3 303 75.6
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 2.7e-127 459.5 418 55.3
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 5.6e-125 451.8 262 86.3
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 2.5e-117 426.4 322 68.3
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.7e-113 413.7 402 55.7
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 6.0e-111 405.2 281 72.2
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 3.3e-109 399.4 240 84.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 2.6e-106 389.8 280 69.6
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.5e-101 374.0 421 47.7
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 9.0e-99 364.8 386 51.6
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 3.8e-97 359.4 407 50.6
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 8.4e-97 358.2 405 49.6
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.0e-90 337.0 315 58.4
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.4e-88 330.9 218 77.1
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.5e-85 320.9 242 66.1
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 9.7e-85 318.2 202 78.7
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 4.5e-82 309.3 263 60.1
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 2.5e-80 303.5 307 52.8
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 1.8e-78 297.4 364 44.8
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 2.6e-77 293.5 289 54.3
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.0e-73 281.6 356 48.6
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.9e-64 250.8 228 59.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 9.7e-61 238.4 166 73.5
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 8.5e-57 225.3 409 35.7
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.0e-53 214.2 144 73.6
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.4e-51 206.1 137 70.8
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.6e-50 204.5 179 59.8
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 3.8e-49 199.9 153 64.7
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 5.0e-49 199.5 125 75.2
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 3.1e-43 180.3 400 33.0
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.0e-38 163.7 306 34.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 1.1e-35 155.2 88 87.5
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 7.0e-35 152.5 101 78.2
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 5.0e-33 146.4 106 74.5
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.3e-28 131.7 97 62.9
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 5.4e-27 126.3 157 45.2
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.5e-24 118.2 354 29.4
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.9e-24 117.9 490 25.7
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.6e-18 98.2 113 54.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 5.6e-16 89.7 91 47.3
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 3.6e-15 87.0 54 79.6
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.1e-15 85.9 65 61.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.7e-12 78.2 79 50.6


User provided reference genes

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