Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.2e-130 468.4 232 100.0
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.2e-130 468.4 232 100.0
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.9e-62 242.7 122 100.0
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 8.4e-46 188.0 151 74.2
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.3e-33 147.5 143 57.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 9.0e-32 141.4 156 51.3
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.5e-31 140.6 142 57.7
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 4.5e-31 139.0 158 53.2
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.0e-30 137.9 144 56.2
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.0e-30 137.9 143 53.8
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.7e-30 137.1 142 52.8
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.8e-30 136.0 148 54.1
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.9e-29 133.7 148 52.0
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.5e-29 133.3 147 54.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.2e-29 132.9 147 54.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 4.2e-29 132.5 142 51.4
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 4.2e-29 132.5 146 53.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 5.5e-29 132.1 144 53.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 7.1e-29 131.7 130 54.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 7.1e-29 131.7 145 50.3
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.1e-29 131.7 146 53.4
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 9.3e-29 131.3 141 53.2
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 9.3e-29 131.3 147 50.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-28 130.6 119 57.1
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.6e-28 130.6 122 55.7
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 2.7e-28 129.8 150 49.3
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.5e-28 129.4 130 53.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 3.5e-28 129.4 119 57.1
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.6e-28 129.0 141 51.1
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 4.6e-28 129.0 135 54.1
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.6e-28 129.0 150 51.3
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 6.0e-28 128.6 119 56.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 7.9e-28 128.3 130 53.1
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 7.9e-28 128.3 129 55.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.0e-27 127.9 149 49.7
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.0e-27 127.9 130 54.6
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.0e-27 127.9 120 57.5
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.3e-27 127.5 127 55.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.3e-27 127.5 143 50.3
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.8e-27 127.1 120 55.0
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.8e-27 127.1 154 48.7
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.8e-27 127.1 121 57.9
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 3.0e-27 126.3 119 56.3
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 3.0e-27 126.3 136 52.9
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 3.9e-27 125.9 133 53.4
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 5.1e-27 125.6 119 55.5
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 5.1e-27 125.6 149 48.3
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 6.7e-27 125.2 150 50.0
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 6.7e-27 125.2 148 52.7
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.7e-27 125.2 148 52.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.7e-27 124.8 121 56.2
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 8.7e-27 124.8 129 50.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 8.7e-27 124.8 129 50.4
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 8.7e-27 124.8 147 49.7
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 8.7e-27 124.8 130 53.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.1e-26 124.4 146 49.3
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-26 124.4 152 47.4
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.1e-26 124.4 149 48.3
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.5e-26 124.0 134 53.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.5e-26 124.0 119 54.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.9e-26 123.6 148 49.3
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.9e-26 123.6 147 51.0
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.9e-26 123.6 149 49.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 2.5e-26 123.2 133 51.1
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.3e-26 122.9 142 52.8
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.3e-26 122.9 143 51.7
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.3e-26 122.9 130 53.1
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 3.3e-26 122.9 119 53.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 4.3e-26 122.5 164 45.7
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 5.7e-26 122.1 117 57.3
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 5.7e-26 122.1 119 54.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 7.4e-26 121.7 130 53.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.4e-26 121.7 116 55.2
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 7.4e-26 121.7 117 56.4
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 7.4e-26 121.7 147 49.0
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 9.7e-26 121.3 137 51.1
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 9.7e-26 121.3 130 51.5
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.6e-25 120.6 150 47.3
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.6e-25 120.6 142 47.9
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 1.6e-25 120.6 161 44.7
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.6e-25 120.6 148 47.3
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.2e-25 120.2 125 53.6
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.2e-25 120.2 146 48.6
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 2.2e-25 120.2 121 52.9
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.2e-25 120.2 121 53.7
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.7e-25 119.4 118 53.4
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.8e-25 119.0 158 46.8
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 4.8e-25 119.0 115 55.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 6.3e-25 118.6 146 47.3
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 6.3e-25 118.6 148 45.9
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 8.2e-25 118.2 153 45.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 8.2e-25 118.2 145 46.2
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.4e-24 116.7 150 46.7
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 4.1e-24 115.9 143 49.0
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 4.1e-24 115.9 121 53.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 6.9e-24 115.2 117 52.1
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 9.0e-24 114.8 144 47.9
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 1.3e-22 110.9 117 52.1
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.8e-22 109.4 148 46.6
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 3.8e-22 109.4 121 50.4
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 4.2e-21 105.9 146 45.9
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.7e-20 103.2 101 55.4
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.0e-19 101.3 167 38.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 6.7e-19 98.6 118 48.3
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 6.3e-17 92.0 142 43.7
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.8e-16 90.5 98 50.0
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.1e-16 89.7 94 50.0
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.2e-15 87.8 101 48.5
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.2e-15 87.8 101 48.5
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.5e-15 87.4 113 46.9
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 5.9e-15 85.5 84 53.6
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.5e-13 80.1 115 45.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.2e-13 79.7 114 45.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.0e-11 73.2 117 40.2
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.6e-10 70.1 57 54.4
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.2e-09 67.0 93 39.8
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.2e-09 67.0 90 46.7
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.7e-09 66.2 117 34.2
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.3e-09 65.5 60 51.7
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.6e-07 60.1 82 46.3
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 2.6e-07 60.1 93 39.8


User provided reference genes

Program Settings