Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 1.0e-44 183.0 90 100.0
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 1.0e-44 183.0 90 100.0
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.2e-32 142.9 92 79.3
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 3.9e-31 137.9 91 78.0
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 3.9e-31 137.9 91 78.0
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 8.6e-31 136.7 90 75.6
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 1.1e-30 136.3 92 77.2
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-30 135.6 92 78.3
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.9e-30 135.6 90 76.7
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 4.0e-28 127.9 83 78.3
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 9.9e-27 123.2 92 76.1
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 9.9e-27 123.2 92 76.1
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.3e-26 122.9 86 72.1
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 2.2e-26 122.1 81 75.3
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 3.2e-25 118.2 93 67.7
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 5.4e-25 117.5 93 67.7
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 2.7e-24 115.2 93 67.7
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.0e-23 113.2 91 65.9
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 6.6e-23 110.5 84 67.9
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 8.6e-23 110.2 84 67.9
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-22 109.8 84 69.0
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 3.3e-22 108.2 90 67.8
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 4.3e-22 107.8 93 66.7
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 4.3e-22 107.8 93 66.7
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 4.3e-22 107.8 92 68.5
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 5.6e-22 107.5 92 66.3
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 7.3e-22 107.1 90 70.0
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-21 106.3 83 67.5
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-20 103.2 92 67.4
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 5.2e-20 100.9 87 62.1
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 1.5e-19 99.4 90 64.4
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 1.5e-19 99.4 90 64.4
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 4.4e-19 97.8 93 65.6
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 2.9e-18 95.1 81 64.2
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 6.4e-18 94.0 94 59.6
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 1.9e-17 92.4 94 58.5
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 2.1e-16 89.0 82 57.3
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.3e-15 86.3 83 59.0
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 3.9e-15 84.7 83 57.8
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 6.6e-15 84.0 86 55.8
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 6.6e-15 84.0 81 56.8
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.6e-15 84.0 83 56.6
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.6e-15 84.0 83 56.6
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 8.7e-15 83.6 82 54.9
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-14 82.8 87 55.2
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 3.3e-14 81.6 83 54.2
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 4.3e-14 81.3 86 57.0
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 9.6e-14 80.1 81 58.0
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 9.6e-14 80.1 82 54.9
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 2.1e-13 79.0 82 50.0
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 2.1e-13 79.0 82 50.0
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 2.1e-13 79.0 80 56.2
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 2.8e-13 78.6 82 53.7
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 4.7e-13 77.8 87 55.2
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 4.7e-13 77.8 80 56.2
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 6.2e-13 77.4 81 54.3
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 6.2e-13 77.4 80 53.8
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 8.1e-13 77.0 80 52.5
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 1.1e-12 76.6 81 56.8
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 1.4e-12 76.3 72 55.6
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 1.8e-12 75.9 81 54.3
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-12 75.9 87 54.0
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-12 75.9 87 54.0
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 2.4e-12 75.5 88 53.4
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 3.1e-12 75.1 79 51.9
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 5.3e-12 74.3 87 48.3
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.5e-11 72.8 84 51.2
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.9e-10 68.6 81 51.9
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 6.4e-10 67.4 80 51.2
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.1e-09 66.6 89 51.7
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 3.2e-09 65.1 83 48.2
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 3.2e-09 65.1 83 48.2
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.2e-09 65.1 85 49.4
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 3.2e-09 65.1 78 47.4
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 9.3e-09 63.5 76 48.7
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.6e-08 62.8 83 49.4
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 3.5e-08 61.6 76 47.4
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 6.0e-08 60.8 76 46.1
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.0e-08 60.8 76 50.0
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 1.0e-07 60.1 75 45.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.0e-07 60.1 76 51.3
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.0e-07 60.1 76 51.3
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.7e-07 59.3 83 45.8
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 1.7e-07 59.3 81 46.9
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.3e-07 58.9 83 45.8
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-07 58.9 64 57.8
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-07 58.9 64 57.8
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-07 58.9 64 57.8
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 3.0e-07 58.5 69 50.7
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.9e-07 58.2 76 48.7
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.9e-07 58.2 76 48.7
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.9e-07 58.2 81 48.1
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 5.1e-07 57.8 81 45.7
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 6.6e-07 57.4 83 50.6
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 8.7e-07 57.0 74 51.4
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 1.5e-06 56.2 91 45.1
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 2.5e-06 55.5 73 49.3
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 2.5e-06 55.5 73 49.3
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.3e-06 55.1 89 43.8
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.3e-06 55.1 89 43.8
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.3e-06 55.1 89 43.8
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 5.6e-06 54.3 75 45.3
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 7.3e-06 53.9 72 47.2
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 7.3e-06 53.9 80 48.8
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 9.6e-06 53.5 85 48.2
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 9.6e-06 53.5 69 49.3
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.6e-06 53.5 83 45.8
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.6e-06 53.5 76 48.7
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 9.6e-06 53.5 75 46.7
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 9.6e-06 53.5 89 44.9
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 9.6e-06 53.5 91 42.9


User provided reference genes

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