Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 0.0e+00 1251.9 754 100.0
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.4e-211 739.6 758 57.8
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 2.7e-202 709.5 758 56.3
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 6.0e-194 681.8 768 54.2
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 5.6e-192 675.2 786 53.6
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 3.7e-191 672.5 795 53.7
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 9.3e-187 657.9 777 52.4
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 6.0e-186 655.2 772 53.9
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.8e-183 646.4 772 53.6
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 3.3e-176 622.9 788 51.0
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 9.0e-174 614.8 792 50.6
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 4.6e-170 602.4 772 49.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 4.3e-168 595.9 776 50.4
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.5e-157 560.8 767 48.1
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 3.8e-156 556.2 778 47.3
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.7e-146 523.5 770 45.6
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 8.0e-146 521.9 689 48.0
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 3.4e-144 516.5 770 45.5
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 3.2e-139 500.0 766 43.6
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 3.5e-133 479.9 792 42.7
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 2.0e-128 464.2 801 40.9
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 3.7e-127 459.9 788 41.1
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.5e-125 453.0 784 42.7
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 7.3e-123 445.7 527 53.3
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.6e-122 444.5 794 40.8
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.6e-122 444.5 786 42.0
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 3.6e-122 443.4 785 42.3
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 4.7e-122 443.0 727 42.8
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 6.1e-122 442.6 787 41.4
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.0e-121 441.8 791 41.1
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.3e-121 440.7 772 40.8
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 9.8e-120 435.3 771 41.4
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.2e-119 434.1 805 40.2
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 3.7e-119 433.3 793 41.1
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 4.9e-119 433.0 767 41.3
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.4e-118 431.4 728 41.8
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.9e-118 431.0 771 41.2
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.4e-118 430.6 783 40.4
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.6e-117 427.9 786 40.5
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.6e-117 426.4 784 41.6
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 2.3e-116 424.1 808 39.5
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.3e-116 424.1 788 40.1
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.9e-116 423.3 780 40.5
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.0e-116 422.9 779 42.1
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.1e-115 421.8 779 40.4
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 9.5e-115 418.7 792 39.5
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.6e-114 417.9 781 40.3
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.1e-113 413.7 751 40.5
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.0e-112 411.0 753 40.8
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.0e-112 411.0 795 39.2
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 6.4e-111 406.0 729 41.8
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 3.2e-110 403.7 526 49.6
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 4.1e-110 403.3 805 39.4
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 9.2e-110 402.1 811 38.2
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 2.7e-109 400.6 804 39.1
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.0e-108 398.7 716 41.6
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 2.3e-108 397.5 810 38.3
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 8.6e-108 395.6 788 38.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.1e-107 395.2 795 38.6
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.3e-105 387.5 794 37.9
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.1e-105 387.1 779 39.2
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 6.8e-105 386.0 527 47.2
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.8e-105 386.0 804 39.1
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 8.9e-105 385.6 795 39.0
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.0e-104 384.4 787 38.6
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.6e-104 384.0 779 38.8
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.7e-103 381.3 801 36.2
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.9e-103 379.8 787 38.5
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.4e-102 378.3 779 37.9
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.1e-102 375.9 786 38.3
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 3.5e-101 373.6 795 37.4
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.5e-99 368.2 788 38.8
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.9e-99 367.9 567 45.0
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 5.6e-99 366.3 805 35.8
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 7.3e-99 365.9 856 36.8
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 2.8e-98 364.0 761 36.4
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.0e-97 360.1 763 38.5
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.2e-97 359.8 518 46.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 3.4e-96 357.1 824 35.6
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 4.9e-95 353.2 456 49.8
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.9e-94 351.3 777 35.6
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.2e-94 350.5 800 35.9
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.2e-93 348.6 861 33.9
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.6e-93 348.2 788 36.8
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.0e-93 346.3 784 35.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.3e-92 345.1 808 36.1
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.1e-91 342.0 806 35.4
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.3e-90 338.6 921 33.8
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 3.6e-90 337.0 821 37.3
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 3.6e-90 337.0 493 45.4
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.1e-89 335.5 763 35.5
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.4e-89 335.1 777 35.6
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.4e-89 335.1 791 35.7
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.4e-89 334.3 495 44.6
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.4e-89 334.3 559 43.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 3.1e-89 334.0 784 36.2
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.6e-88 330.9 845 34.7
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 5.8e-88 329.7 794 34.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.2e-87 327.8 541 43.8
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.0e-84 318.9 817 35.0
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 3.9e-84 317.0 788 34.5
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.6e-84 316.2 785 35.2
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.1e-81 307.4 526 41.6
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 6.9e-81 306.2 744 36.3
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.4e-80 303.9 791 32.7
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 9.9e-80 302.4 296 55.1
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.1e-78 298.9 525 39.6
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.4e-78 298.5 737 33.8
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.9e-78 298.1 519 40.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 5.4e-78 296.6 301 54.2
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.6e-77 295.0 406 45.1
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 6.0e-77 293.1 467 42.6
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 3.9e-76 290.4 371 51.8
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 2.5e-75 287.7 735 33.1
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.3e-75 287.3 449 43.2
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 3.7e-74 283.9 491 41.8
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-73 282.3 739 33.6
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.4e-73 282.0 777 32.9
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 3.1e-73 280.8 486 41.4
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.2e-72 278.9 521 38.6
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.5e-72 278.5 526 38.0
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.6e-72 277.7 735 32.4
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.6e-72 277.7 472 40.7
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.6e-72 277.7 271 57.9
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 4.5e-72 276.9 446 41.9
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 4.5e-72 276.9 383 46.7
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.7e-71 275.0 739 32.5
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.1e-70 269.6 397 44.3
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 9.3e-70 269.2 768 31.6
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.6e-69 268.5 739 32.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 6.0e-69 266.5 742 31.8
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 6.0e-69 266.5 517 38.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.3e-68 264.6 749 31.1
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 5.1e-68 263.5 738 32.5
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 2.1e-66 258.1 272 56.2
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.8e-66 257.7 741 32.4
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.8e-66 257.7 258 57.4
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 4.8e-66 256.9 494 39.7
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-65 255.4 334 45.5
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.8e-65 255.0 465 38.1
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 9.0e-65 252.7 738 31.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 7.6e-64 249.6 291 51.5
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.0e-63 249.2 737 31.6
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.9e-63 247.7 296 49.0
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.6e-61 241.9 314 46.8
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.3e-60 238.8 428 39.5
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.3e-60 238.0 274 51.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 2.8e-58 231.1 428 36.9
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 5.0e-55 220.3 754 30.8
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.5e-54 218.0 516 36.2
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 9.4e-54 216.1 317 42.6
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 7.9e-53 213.0 283 45.6
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.0e-52 211.1 230 51.3
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 4.2e-46 190.7 519 32.8
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.0e-36 159.5 142 62.7
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.6e-35 154.8 187 52.9
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.6e-32 145.6 148 54.7
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.7e-32 143.3 141 54.6
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.2e-29 136.0 250 36.8
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 2.6e-27 128.3 165 52.1
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.1e-25 122.9 208 38.5
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-25 122.1 171 43.9
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.9e-24 117.1 96 66.7
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.9e-22 112.1 516 27.5
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.6e-21 109.0 239 33.1
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.2e-10 72.0 65 50.8
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.0e-08 65.5 537 25.3
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.7e-07 62.4 64 46.9
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 8.6e-07 60.1 148 39.2
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.9e-06 58.9 144 34.7
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.9e-06 58.9 111 38.7


User provided reference genes

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