Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 6.1e-71 270.8 144 100.0
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 6.4e-52 207.6 144 75.7
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 8.3e-52 207.2 140 76.4
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.1e-51 206.8 144 76.4
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 3.2e-51 205.3 144 78.5
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.6e-47 193.0 146 72.6
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 4.7e-47 191.4 144 73.6
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 8.0e-47 190.7 147 71.4
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.3e-44 183.3 144 70.8
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 2.1e-42 176.0 132 72.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.0e-41 173.7 143 65.7
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 3.0e-41 172.2 145 66.2
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.1e-40 170.2 145 65.5
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 5.6e-40 167.9 164 59.8
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.4e-38 163.3 141 63.8
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 6.8e-38 161.0 146 64.4
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 6.8e-38 161.0 145 66.2
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 8.9e-38 160.6 145 62.8
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 8.9e-38 160.6 145 64.8
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.2e-37 160.2 150 64.7
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.2e-37 160.2 145 66.2
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.5e-37 159.8 145 66.2
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 2.0e-37 159.5 144 64.6
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 3.4e-37 158.7 143 65.7
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 5.8e-37 157.9 145 64.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.8e-37 157.9 144 62.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 5.8e-37 157.9 141 62.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.3e-36 156.8 144 63.9
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.7e-36 156.4 144 63.2
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 8.3e-36 154.1 143 62.2
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 1.4e-35 153.3 149 61.1
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 1.4e-35 153.3 149 61.1
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.9e-35 152.9 145 60.0
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.9e-35 152.9 146 60.3
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.4e-35 152.5 146 58.9
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 3.2e-35 152.1 142 59.2
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 3.2e-35 152.1 145 62.8
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 4.1e-35 151.8 149 60.4
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 4.1e-35 151.8 149 60.4
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 5.4e-35 151.4 148 62.8
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 7.1e-35 151.0 145 64.1
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 9.2e-35 150.6 146 58.2
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.2e-34 150.2 147 62.6
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.6e-34 149.8 149 60.4
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 2.7e-34 149.1 118 68.6
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.7e-34 149.1 150 62.7
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 2.7e-34 149.1 154 61.0
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.7e-34 149.1 139 60.4
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 3.5e-34 148.7 132 66.7
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.0e-34 147.9 146 58.9
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 7.8e-34 147.5 148 60.8
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.0e-33 147.1 141 59.6
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.0e-33 147.1 145 62.1
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.3e-33 146.7 149 60.4
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.3e-33 146.7 145 58.6
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.7e-33 146.4 149 60.4
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 2.3e-33 146.0 149 61.1
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 3.9e-33 145.2 146 61.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.1e-33 144.8 149 60.4
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 5.1e-33 144.8 139 63.3
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 8.6e-33 144.1 142 62.7
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 8.6e-33 144.1 147 59.2
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.5e-32 143.3 148 60.8
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.9e-32 142.9 138 62.3
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.5e-32 142.5 141 56.7
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 3.3e-32 142.1 131 62.6
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 5.6e-32 141.4 142 59.2
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 5.6e-32 141.4 136 60.3
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.3e-32 141.0 103 70.9
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 9.5e-32 140.6 94 74.5
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 9.5e-32 140.6 146 59.6
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.2e-31 140.2 137 56.9
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.6e-31 139.8 135 59.3
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.1e-31 139.4 147 61.2
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 2.8e-31 139.0 123 63.4
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.8e-31 139.0 151 58.9
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 3.6e-31 138.7 153 60.1
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 3.6e-31 138.7 136 58.1
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.7e-31 138.3 142 58.5
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 6.2e-31 137.9 131 59.5
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.4e-30 136.7 148 56.8
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.1e-30 135.6 132 59.8
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 4.0e-30 135.2 142 57.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 4.0e-30 135.2 148 54.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 5.2e-30 134.8 140 55.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 5.2e-30 134.8 133 56.4
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 8.9e-30 134.0 132 59.1
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 8.9e-30 134.0 141 58.9
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.5e-29 133.3 131 57.3
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.5e-29 133.3 95 72.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.4e-29 131.7 114 64.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 5.8e-29 131.3 144 54.9
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 9.9e-29 130.6 141 59.6
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 6.4e-28 127.9 146 57.5
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 8.4e-28 127.5 149 54.4
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.9e-27 126.3 103 62.1
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.4e-27 125.9 114 62.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.0e-25 119.0 87 69.0
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 5.2e-22 108.2 117 52.1
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 4.4e-21 105.1 109 50.5
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 5.8e-21 104.8 110 54.5
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 7.6e-21 104.4 86 67.4
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 7.1e-19 97.8 79 63.3
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.2e-18 97.1 110 53.6
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.6e-18 96.7 133 45.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.7e-17 93.2 82 54.9
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 3.0e-17 92.4 73 61.6
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.1e-14 84.0 101 47.5
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 4.0e-14 82.0 89 46.1
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 6.9e-14 81.3 107 44.9
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 3.4e-13 79.0 55 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 5.8e-13 78.2 85 44.7
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.1e-11 73.9 119 47.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.4e-11 73.6 71 53.5
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 5.4e-11 71.6 78 46.2
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 3.7e-07 58.9 34 76.5
arahy.Tifrunner.gnm1.ann1.KM2VEP Arachis hypogaea HOM05D000049 ORTHO05D008785 6.9e-06 54.7 52 63.5


User provided reference genes

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